RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 VEGFAP15692 232 aaPredicted RBP19.01■□□□□ 0.63
SS18-226ENST00000585241 LIFRP42702 1097 aa19.01■□□□□ 0.63
SS18-226ENST00000585241 SEC23AQ15436 765 aa19.01■□□□□ 0.63
SS18-226ENST00000585241 CHST3Q7LGC8 479 aa19.01■□□□□ 0.63
SS18-226ENST00000585241 HSCBQ8IWL3 235 aa19.01■□□□□ 0.63
SS18-226ENST00000585241 DCPSQ96C86 337 aaKnown RBP19.01■□□□□ 0.63
SS18-226ENST00000585241 ANGEL1Q9UNK9 670 aaKnown RBP19.01■□□□□ 0.63
SS18-226ENST00000585241 POLR2AP24928 1970 aaKnown RBP19.01■□□□□ 0.63
SS18-226ENST00000585241 TSPY2A6NKD2 308 aa19■□□□□ 0.63
SS18-226ENST00000585241 SLURP2P0DP57 97 aa19■□□□□ 0.63
SS18-226ENST00000585241 NOVP48745 357 aa19■□□□□ 0.63
SS18-226ENST00000585241 TFAP4Q01664 338 aa19■□□□□ 0.63
SS18-226ENST00000585241 BECN1Q14457 450 aa19■□□□□ 0.63
SS18-226ENST00000585241 SART3Q15020 963 aaKnown RBP19■□□□□ 0.63
SS18-226ENST00000585241 CCDC178Q5BJE1 867 aa19■□□□□ 0.63
SS18-226ENST00000585241 SGMS1Q86VZ5 419 aa19■□□□□ 0.63
SS18-226ENST00000585241 IQCA1Q86XH1 822 aa19■□□□□ 0.63
SS18-226ENST00000585241 HOOK2Q96ED9 719 aa19■□□□□ 0.63
SS18-226ENST00000585241 LRRC2Q9BYS8 371 aa19■□□□□ 0.63
SS18-226ENST00000585241 SCAF8Q9UPN6 1271 aaKnown RBP19■□□□□ 0.63
SS18-226ENST00000585241 SSC5DA1L4H1 1573 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 IGKV6D-41A0A0C4DH26 115 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 FAM196BA6NMK8 535 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 K7ELQ4 463 aaPredicted RBP18.99■□□□□ 0.63
SS18-226ENST00000585241 FAM47AQ5JRC9 791 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 SULF1Q8IWU6 871 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 ANKS1AQ92625 1134 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 BRF1Q92994 677 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 ZSCAN10Q96SZ4 725 aaPredicted RBP18.99■□□□□ 0.63
SS18-226ENST00000585241 UBAC1Q9BSL1 405 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.99■□□□□ 0.63
SS18-226ENST00000585241 TRIM34Q9BYJ4 488 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.99■□□□□ 0.63
SS18-226ENST00000585241 LY9Q9HBG7 655 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 LIMCH1Q9UPQ0 1083 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 TNKSO95271 1327 aa18.99■□□□□ 0.63
SS18-226ENST00000585241 IFIT3O14879 490 aaKnown RBP18.98■□□□□ 0.63
SS18-226ENST00000585241 TSPY3P0CV98 308 aa18.98■□□□□ 0.63
SS18-226ENST00000585241 TSPY8P0CW00 308 aa18.98■□□□□ 0.63
SS18-226ENST00000585241 AKR1B1P15121 316 aa18.98■□□□□ 0.63
SS18-226ENST00000585241 TMEM67Q5HYA8 995 aa18.98■□□□□ 0.63
SS18-226ENST00000585241 NBPF12Q5TAG4 269 aaPredicted RBP18.98■□□□□ 0.63
SS18-226ENST00000585241 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
SS18-226ENST00000585241 ZSCAN31Q96LW9 406 aaPredicted RBP18.98■□□□□ 0.63
SS18-226ENST00000585241 GPHNQ9NQX3 736 aaPredicted RBP18.98■□□□□ 0.63
SS18-226ENST00000585241 IL17RBQ9NRM6 502 aa18.98■□□□□ 0.63
SS18-226ENST00000585241 WTAPQ15007 396 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 CERKLQ49MI3 558 aaPredicted RBP18.97■□□□□ 0.63
SS18-226ENST00000585241 DCAF15Q66K64 600 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 RCSD1Q6JBY9 416 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 KRT26Q7Z3Y9 468 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 DGKHQ86XP1 1220 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 TMTC2Q8N394 836 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 RRAGCQ9HB90 399 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 SH2B1Q9NRF2 756 aaPredicted RBP18.97■□□□□ 0.63
SS18-226ENST00000585241 TPCN1Q9ULQ1 816 aa18.97■□□□□ 0.63
SS18-226ENST00000585241 ERICH2A1L162 156 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 PHF20L1A8MW92 1017 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 RCAN1P53805 252 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 FGD1P98174 961 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 RRP1BQ14684 758 aaKnown RBP18.96■□□□□ 0.63
SS18-226ENST00000585241 EAPPQ56P03 285 aaPredicted RBP18.96■□□□□ 0.63
SS18-226ENST00000585241 ZNF274Q96GC6 653 aaPredicted RBP18.96■□□□□ 0.63
SS18-226ENST00000585241 TMX3Q96JJ7 454 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 IPO9Q96P70 1041 aaKnown RBP18.96■□□□□ 0.63
SS18-226ENST00000585241 ZKSCAN3Q9BRR0 538 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 ZNF112Q9UJU3 913 aa18.96■□□□□ 0.63
SS18-226ENST00000585241 NID2Q14112 1375 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 ADM5C9JUS6 153 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 NMT2O60551 498 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 APOBRQ0VD83 1088 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 CUL4AQ13619 759 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 SUPT20HL1Q3ZLR7 823 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 PPP4R3BQ5MIZ7 849 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 TMEM179Q6ZVK1 233 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 CDC37L1Q7L3B6 337 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 LDHDQ86WU2 507 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 SENP2Q9HC62 589 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 NMRK2Q9NPI5 230 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 GINM1Q9NU53 330 aa18.95■□□□□ 0.62
SS18-226ENST00000585241 LARGE1O95461 756 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 GUCY1A2P33402 732 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 CAP2P40123 477 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 ME3Q16798 604 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 ABCB5Q2M3G0 1257 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 MIGA2Q7L4E1 593 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 CEP95Q96GE4 821 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 ZNF341Q9BYN7 854 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 MTMR4Q9NYA4 1195 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 BRPF3Q9ULD4 1205 aa18.94■□□□□ 0.62
SS18-226ENST00000585241 PAPPA2Q9BXP8 1791 aa18.93■□□□□ 0.62
SS18-226ENST00000585241 POTEIP0CG38 1075 aa18.93■□□□□ 0.62
SS18-226ENST00000585241 POTEJP0CG39 1038 aa18.93■□□□□ 0.62
SS18-226ENST00000585241 IFIT1BQ5T764 474 aaKnown RBP18.93■□□□□ 0.62
SS18-226ENST00000585241 PRAMEF18Q5VWM3 479 aa18.93■□□□□ 0.62
SS18-226ENST00000585241 APOA5Q6Q788 366 aa18.93■□□□□ 0.62
SS18-226ENST00000585241 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
SS18-226ENST00000585241 LARP6Q9BRS8 491 aaKnown RBP18.93■□□□□ 0.62
SS18-226ENST00000585241 KLF18A0A0U1RQI7 1052 aa18.92■□□□□ 0.62
SS18-226ENST00000585241 PFKFB2O60825 505 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms