RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SPATA32Q96LK8 384 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 KRT23Q9C075 422 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 RNF41Q9H4P4 317 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PRELPP51888 382 aa17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SERPINA10Q9UK55 444 aa17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 FLT1P17948 1338 aa17.42■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PFKFB2O60825 505 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CIAPIN1Q6FI81 312 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 AMOTL1Q8IY63 956 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 LEO1Q8WVC0 666 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 GMLQ99445 158 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 WDR19Q8NEZ3 1342 aa17.41■□□□□ 0.38
CDK5RAP3-236ENST00000584991 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 APOBRQ0VD83 1088 aa17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PICALMQ13492 652 aa17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 NOLC1Q14978 699 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 RGS22Q8NE09 1264 aa17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PRDM1O75626 825 aa17.39■□□□□ 0.38
CDK5RAP3-236ENST00000584991 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SLC3A2P08195 630 aaKnown RBP17.39■□□□□ 0.38
CDK5RAP3-236ENST00000584991 TNMDQ9H2S6 317 aa17.39■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CTAGE5O15320 804 aa17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 FGRP09769 529 aa17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 PLCD1P51178 756 aa17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 STK3Q13188 491 aa17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 AGBL3Q8NEM8 1001 aa17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 CLSTN2Q9H4D0 955 aa17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DDX4Q9NQI0 724 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-236ENST00000584991 PCP11498 1178 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 TYRO3Q06418 890 aa17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 RESTQ13127 1097 aa17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 TNIP1Q15025 636 aa17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ZNF274Q96GC6 653 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 HDAC9Q9UKV0 1011 aa17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDK5RAP3-236ENST00000584991 UQCRHLA0A096LP55 91 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 H3BQV1 296 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 UQCRHP07919 91 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 PDE4BQ07343 736 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ESR2Q92731 530 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 SH2B2O14492 632 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 RANBP6O60518 1105 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 CACNB3P54284 484 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 NFIAQ12857 509 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 FERMT3Q86UX7 667 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 PRMT6Q96LA8 375 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ANGEL1Q9UNK9 670 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 MRVI1Q9Y6F6 885 aa17.37■□□□□ 0.37
CDK5RAP3-236ENST00000584991 SBF1O95248 1867 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DICER1Q9UPY3 1922 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 FZD9O00144 591 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ORC4O43929 436 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 LIG1P18858 919 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 EVCP57679 992 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 TMEM67Q5HYA8 995 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DACT1Q9NYF0 836 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ROBO3Q96MS0 1386 aa17.36■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 MYRIPQ8NFW9 859 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 OSBPL5Q9H0X9 879 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 RCOR1Q9UKL0 485 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 KLF18A0A0U1RQI7 1052 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 GTF2F1P35269 517 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 SCRN1Q12765 414 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 LY9Q9HBG7 655 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 SENP2Q9HC62 589 aa17.35■□□□□ 0.37
CDK5RAP3-236ENST00000584991 SPDYE2BA6NHP3 402 aa17.34■□□□□ 0.37
CDK5RAP3-236ENST00000584991 DTNBO60941 627 aa17.34■□□□□ 0.37
CDK5RAP3-236ENST00000584991 SPDYE6P0CI01 402 aa17.34■□□□□ 0.37
CDK5RAP3-236ENST00000584991 LMNB1P20700 586 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms