RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ADCK5Q3MIX3 580 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 BLOC1S2Q6QNY1 142 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 IL17RAQ96F46 866 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 TACC3Q9Y6A5 838 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 DOCK1Q14185 1865 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 MPHOSPH10O00566 681 aaKnown RBP21.61■■□□□ 1.05
RFFL-211ENST00000584541 KDM4AO75164 1064 aa21.61■■□□□ 1.05
RFFL-211ENST00000584541 ITGBL1O95965 494 aaPredicted RBP21.61■■□□□ 1.05
RFFL-211ENST00000584541 CASTP20810 708 aaKnown RBP21.61■■□□□ 1.05
RFFL-211ENST00000584541 IREB2P48200 963 aaKnown RBP21.61■■□□□ 1.05
RFFL-211ENST00000584541 TFAP4Q01664 338 aa21.61■■□□□ 1.05
RFFL-211ENST00000584541 PRKG1Q13976 671 aa21.61■■□□□ 1.05
RFFL-211ENST00000584541 ARMC9Q7Z3E5 817 aa21.61■■□□□ 1.05
RFFL-211ENST00000584541 CABP5Q9NP86 173 aa21.61■■□□□ 1.05
RFFL-211ENST00000584541 PAPPA2Q9BXP8 1791 aa21.61■■□□□ 1.05
RFFL-211ENST00000584541 MCM5P33992 734 aa21.6■■□□□ 1.05
RFFL-211ENST00000584541 ABCB5Q2M3G0 1257 aa21.6■■□□□ 1.05
RFFL-211ENST00000584541 IQCA1Q86XH1 822 aa21.6■■□□□ 1.05
RFFL-211ENST00000584541 WRNIP1Q96S55 665 aa21.6■■□□□ 1.05
RFFL-211ENST00000584541 ANGEL1Q9UNK9 670 aaKnown RBP21.6■■□□□ 1.05
RFFL-211ENST00000584541 CYP46A1Q9Y6A2 500 aa21.6■■□□□ 1.05
RFFL-211ENST00000584541 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 PHF20L1A8MW92 1017 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 CTNND1O60716 968 aaKnown RBP21.59■■□□□ 1.05
RFFL-211ENST00000584541 USP2O75604 605 aaPredicted RBP21.59■■□□□ 1.05
RFFL-211ENST00000584541 CELF2O95319 508 aaKnown RBP21.59■■□□□ 1.05
RFFL-211ENST00000584541 CAP2P40123 477 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 FKBP1BP68106 108 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 FSTL1Q12841 308 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 FAM47AQ5JRC9 791 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 DHX32Q7L7V1 743 aaKnown RBP21.59■■□□□ 1.05
RFFL-211ENST00000584541 MB21D2Q8IYB1 491 aaPredicted RBP21.59■■□□□ 1.05
RFFL-211ENST00000584541 KLRG1Q96E93 195 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 ZSWIM6Q9HCJ5 1215 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 GINM1Q9NU53 330 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 ZSWIM5Q9P217 1185 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 ZNF112Q9UJU3 913 aa21.59■■□□□ 1.05
RFFL-211ENST00000584541 GREB1LQ9C091 1923 aaPredicted RBP21.59■■□□□ 1.05
RFFL-211ENST00000584541 GDF11O95390 407 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 AKR1B1P15121 316 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 SART3Q15020 963 aaKnown RBP21.58■■□□□ 1.05
RFFL-211ENST00000584541 CCDC178Q5BJE1 867 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 TMEM179Q6ZVK1 233 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 RUFY3Q7L099 469 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 C2orf69Q8N8R5 385 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 NEDD1Q8NHV4 660 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 UBAC1Q9BSL1 405 aa21.58■■□□□ 1.05
RFFL-211ENST00000584541 WDR19Q8NEZ3 1342 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 ERICH2A1L162 156 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 PRC1O43663 620 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 ASNSP08243 561 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 RPS6KB1P23443 525 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 MAP3K9P80192 1104 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 FMR1Q06787 632 aaKnown RBP eCLIP21.57■■□□□ 1.04
RFFL-211ENST00000584541 RABEP1Q15276 862 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 MAP3K11Q16584 847 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 PPP4R3BQ5MIZ7 849 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 IL27Q8NEV9 243 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 GBA2Q9HCG7 927 aaPredicted RBP21.57■■□□□ 1.04
RFFL-211ENST00000584541 FZD1Q9UP38 647 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 CSADQ9Y600 493 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 PLIN4Q96Q06 1357 aa21.57■■□□□ 1.04
RFFL-211ENST00000584541 GH2P01242 217 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 INPP5BP32019 993 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 FGD1P98174 961 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 CYB5R4Q7L1T6 521 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 ANKRD13AQ8IZ07 590 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.56■■□□□ 1.04
RFFL-211ENST00000584541 TMEM87BQ96K49 555 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 KIF2CQ99661 725 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 UPF3BQ9BZI7 483 aaKnown RBP21.56■■□□□ 1.04
RFFL-211ENST00000584541 PICK1Q9NRD5 415 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 TCP11L1Q9NUJ3 509 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 ZBTB21Q9ULJ3 1066 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 MYH4Q9Y623 1939 aa21.56■■□□□ 1.04
RFFL-211ENST00000584541 PASKQ96RG2 1323 aa21.55■■□□□ 1.04
RFFL-211ENST00000584541 RRP1BQ14684 758 aaKnown RBP21.55■■□□□ 1.04
RFFL-211ENST00000584541 RAB3GAP1Q15042 981 aa21.55■■□□□ 1.04
RFFL-211ENST00000584541 CHST3Q7LGC8 479 aa21.55■■□□□ 1.04
RFFL-211ENST00000584541 SCYL3Q8IZE3 742 aa21.55■■□□□ 1.04
RFFL-211ENST00000584541 ZSCAN10Q96SZ4 725 aaPredicted RBP21.55■■□□□ 1.04
RFFL-211ENST00000584541 UNCXA6NJT0 531 aa21.54■■□□□ 1.04
RFFL-211ENST00000584541 IFIT3O14879 490 aaKnown RBP21.54■■□□□ 1.04
RFFL-211ENST00000584541 CPA1P15085 419 aa21.54■■□□□ 1.04
RFFL-211ENST00000584541 NEK4P51957 841 aa21.54■■□□□ 1.04
RFFL-211ENST00000584541 EXOSC10Q01780 885 aaKnown RBP21.54■■□□□ 1.04
RFFL-211ENST00000584541 NOL9Q5SY16 702 aaKnown RBP21.54■■□□□ 1.04
RFFL-211ENST00000584541 ZKSCAN4Q969J2 545 aaPredicted RBP21.54■■□□□ 1.04
RFFL-211ENST00000584541 ZKSCAN3Q9BRR0 538 aa21.54■■□□□ 1.04
RFFL-211ENST00000584541 KANSL2Q9H9L4 492 aa21.54■■□□□ 1.04
RFFL-211ENST00000584541 PDRG1Q9NUG6 133 aa21.54■■□□□ 1.04
RFFL-211ENST00000584541 ANTXR2P58335 489 aa21.53■■□□□ 1.04
RFFL-211ENST00000584541 SEPT2Q15019 361 aa21.53■■□□□ 1.04
RFFL-211ENST00000584541 TMEM67Q5HYA8 995 aa21.53■■□□□ 1.04
RFFL-211ENST00000584541 NKX2-3Q8TAU0 364 aa21.53■■□□□ 1.04
RFFL-211ENST00000584541 TNKSO95271 1327 aa21.53■■□□□ 1.04
RFFL-211ENST00000584541 UBE2Q2LH0YL09 131 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 VGLL4Q14135 290 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 WTAPQ15007 396 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms