RNA–Protein interactions for RNA: ENST00000583528.5

SPECC1-222, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 5

Gene SPECC1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-222	ENST00000583528	IFIT2	P09913	472 aa	Known RBP	18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	GJA8	P48165	433 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	JAG1	P78504	1218 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	TTF1	Q15361	905 aa	Predicted RBP	18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	DPF3	Q92784	378 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	SHISA4	Q96DD7	197 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	KIF1BP	Q96EK5	621 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	UNC93B1	Q9H1C4	597 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	GINM1	Q9NU53	330 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	ZBTB21	Q9ULJ3	1066 aa		18.89	■□□□□ 0.61
SPECC1-222	ENST00000583528	USP17L10	C9JJH3	530 aa		18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	INHA	P05111	366 aa		18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	IRF5	Q13568	498 aa		18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	TTC6	Q86TZ1	520 aa		18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	METTL16	Q86W50	562 aa	Known RBP	18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	PXYLP1	Q8TE99	480 aa		18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	DNAJC2	Q99543	621 aa	Known RBP	18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	CHMP4B	Q9H444	224 aa	Known RBP	18.88	■□□□□ 0.61
SPECC1-222	ENST00000583528	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.87	■□□□□ 0.61
SPECC1-222	ENST00000583528	HABP4	Q5JVS0	413 aa	Known RBP	18.87	■□□□□ 0.61
SPECC1-222	ENST00000583528	U2AF1L4	Q8WU68	220 aa	Known RBP	18.87	■□□□□ 0.61
SPECC1-222	ENST00000583528	SERPINB13	Q9UIV8	391 aa		18.87	■□□□□ 0.61
SPECC1-222	ENST00000583528	CDK5RAP2	Q96SN8	1893 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	SIPA1L1	O43166	1804 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	HTT	P42858	3142 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	MAGEB6P1	A0A0J9YX57	407 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	GH2	P01242	217 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	POLR3D	P05423	398 aa	Predicted RBP	18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	TMED8	Q6PL24	325 aa	Predicted RBP	18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	CCAR1	Q8IX12	1150 aa	Known RBP	18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	P2RX7	Q99572	595 aa	Known RBP	18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	FEZ1	Q99689	392 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	LOC285556	D6RIA3	1793 aa		18.86	■□□□□ 0.61
SPECC1-222	ENST00000583528	GOLIM4	O00461	696 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	SGPL1	O95470	568 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	TFRC	P02786	760 aa	Known RBP	18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	HOXA7	P31268	230 aa	Predicted RBP	18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	RAB3GAP1	Q15042	981 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	SLC9C2	Q5TAH2	1124 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	USP17L2	Q6R6M4	530 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	HTATIP2	Q9BUP3	242 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	CABP5	Q9NP86	173 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	ZBTB40	Q9NUA8	1239 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	RCAN3	Q9UKA8	241 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	FOCAD	Q5VW36	1801 aa		18.85	■□□□□ 0.61
SPECC1-222	ENST00000583528	RAB11FIP3	O75154	756 aa		18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	FARP2	O94887	1054 aa	Predicted RBP	18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	HERVK_113	P62684	666 aa		18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	ZYX	Q15942	572 aa	Known RBP	18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	CERKL	Q49MI3	558 aa	Predicted RBP	18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	DEFB118	Q96PH6	123 aa		18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528	MYH1	P12882	1939 aa		18.84	■□□□□ 0.61
SPECC1-222	ENST00000583528		H0YGN5	161 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	PDE6A	P16499	860 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	ABCB5	Q2M3G0	1257 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	GPRC5A	Q8NFJ5	357 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	RIOK1	Q9BRS2	568 aa	Known RBP	18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	PAGR1	Q9BTK6	254 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	EHD4	Q9H223	541 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	CWC22	Q9HCG8	908 aa	Known RBP	18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	MORF4L1	Q9UBU8	362 aa		18.83	■□□□□ 0.6
SPECC1-222	ENST00000583528	ZNF532	Q9HCE3	1301 aa		18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	CYP2B6	P20813	491 aa		18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	TATDN1	Q6P1N9	297 aa		18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	SIRT2	Q8IXJ6	389 aa		18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	EMILIN3	Q9NT22	766 aa		18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	MCM9	Q9NXL9	1143 aa		18.82	■□□□□ 0.6
SPECC1-222	ENST00000583528	PEX10	O60683	326 aa		18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	HMGCR	P04035	888 aa		18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP14	P54578	494 aa		18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	PDE3A	Q14432	1141 aa		18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	NUDT12	Q9BQG2	462 aa		18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	BOLA2	Q9H3K6	86 aa		18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	COLQ	Q9Y215	455 aa	Predicted RBP	18.81	■□□□□ 0.6
SPECC1-222	ENST00000583528	MPHOSPH10	O00566	681 aa	Known RBP	18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	PLCD1	P51178	756 aa		18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	EDC3	Q96F86	508 aa	Known RBP	18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	TXNRD2	Q9NNW7	524 aa		18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	PAG1	Q9NWQ8	432 aa		18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	PCDH10	Q9P2E7	1040 aa		18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	GJD2	Q9UKL4	321 aa		18.8	■□□□□ 0.6
SPECC1-222	ENST00000583528	DOCK3	Q8IZD9	2030 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L15	C9J2P7	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L13	C9JLJ4	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L11	C9JVI0	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L18	D6R9N7	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L22	D6RA61	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L17	D6RBQ6	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L19	D6RCP7	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L20	D6RJB6	530 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	CAPN2	P17655	700 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	MAPK4	P31152	587 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	ERVK-9	P63128	1117 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	ERVK-24	P63145	666 aa		18.79	■□□□□ 0.6
SPECC1-222	ENST00000583528	USP17L24	Q0WX57	530 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms