RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 MIGA2Q7L4E1 593 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 ZNF444Q8N0Y2 327 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-209ENST00000583327 STK11IPQ8N1F8 1099 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 CRACR2BQ8N4Y2 399 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-209ENST00000583327 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 ANKS1AQ92625 1134 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGB4-209ENST00000583327 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-209ENST00000583327 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 CYP46A1Q9Y6A2 500 aa16.14■□□□□ 0.17
ITGB4-209ENST00000583327 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 KDM4AO75164 1064 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 USP2O75604 605 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-209ENST00000583327 CPA1P15085 419 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 MCM5P33992 734 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 JAG1P78504 1218 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 TFAP4Q01664 338 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 MAP3K11Q16584 847 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 KLRG1Q96E93 195 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 UPF3BQ9BZI7 483 aaKnown RBP16.13■□□□□ 0.17
ITGB4-209ENST00000583327 IL17RBQ9NRM6 502 aa16.13■□□□□ 0.17
ITGB4-209ENST00000583327 RANBP6O60518 1105 aaKnown RBP16.12■□□□□ 0.17
ITGB4-209ENST00000583327 AKR1B1P15121 316 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 CAP2P40123 477 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 NEK4P51957 841 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 EVCP57679 992 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 SEC23AQ15436 765 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 CERKLQ49MI3 558 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-209ENST00000583327 FAM47AQ5JRC9 791 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 RALYLQ86SE5 291 aaKnown RBP16.12■□□□□ 0.17
ITGB4-209ENST00000583327 TMEM87BQ96K49 555 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 GINM1Q9NU53 330 aa16.12■□□□□ 0.17
ITGB4-209ENST00000583327 PRC1O43663 620 aa16.11■□□□□ 0.17
ITGB4-209ENST00000583327 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
ITGB4-209ENST00000583327 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
ITGB4-209ENST00000583327 SIAH1Q8IUQ4 282 aa16.11■□□□□ 0.17
ITGB4-209ENST00000583327 GREB1LQ9C091 1923 aaPredicted RBP16.1■□□□□ 0.17
ITGB4-209ENST00000583327 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
ITGB4-209ENST00000583327 YY1P25490 414 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 LIFRP42702 1097 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 TOB2Q14106 344 aaPredicted RBP16.1■□□□□ 0.17
ITGB4-209ENST00000583327 CHST3Q7LGC8 479 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGB4-209ENST00000583327 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
ITGB4-209ENST00000583327 TRAF5O00463 557 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-209ENST00000583327 TSPY3P0CV98 308 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 TSPY8P0CW00 308 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 FMR1Q06787 632 aaKnown RBP eCLIP16.09■□□□□ 0.17
ITGB4-209ENST00000583327 ABCB5Q2M3G0 1257 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-209ENST00000583327 CCDC178Q5BJE1 867 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 NOL9Q5SY16 702 aaKnown RBP16.09■□□□□ 0.17
ITGB4-209ENST00000583327 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 SGMS1Q86VZ5 419 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 IQCA1Q86XH1 822 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 ZNF784Q8NCA9 323 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-209ENST00000583327 SNX21Q969T3 373 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 MKL1Q969V6 931 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 ZSCAN10Q96SZ4 725 aaPredicted RBP16.09■□□□□ 0.17
ITGB4-209ENST00000583327 TRIM34Q9BYJ4 488 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 MTMR4Q9NYA4 1195 aa16.09■□□□□ 0.17
ITGB4-209ENST00000583327 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.17
ITGB4-209ENST00000583327 UNCXA6NJT0 531 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 PPP1R12BO60237 982 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 NMT2O60551 498 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 CD2BP2O95400 341 aaKnown RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 INPP5BP32019 993 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 LDLRAD1Q5T700 205 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 Q6ZUG5 572 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 TCEANC2Q96MN5 208 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 ZKSCAN3Q9BRR0 538 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 LY9Q9HBG7 655 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 NYAP2Q9P242 653 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 ANGEL1Q9UNK9 670 aaKnown RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
ITGB4-209ENST00000583327 PASKQ96RG2 1323 aa16.08■□□□□ 0.16
ITGB4-209ENST00000583327 IFIT3O14879 490 aaKnown RBP16.07■□□□□ 0.16
ITGB4-209ENST00000583327 TOMM70O94826 608 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 GH2P01242 217 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 ASNSP08243 561 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 NF2P35240 595 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 AK2P54819 239 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 CST9Q5W186 159 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
ITGB4-209ENST00000583327 CEP95Q96GE4 821 aa16.07■□□□□ 0.16
ITGB4-209ENST00000583327 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms