RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 SEC62Q99442 399 aaKnown RBP15.17■□□□□ 0.02
SNORD55-201ENST00000581525 HELLSQ9NRZ9 838 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 PHIPQ8WWQ0 1821 aa15.17■□□□□ 0.02
SNORD55-201ENST00000581525 FOXP2O15409 715 aa15.16■□□□□ 0.02
SNORD55-201ENST00000581525 EVX2Q03828 476 aa15.16■□□□□ 0.02
SNORD55-201ENST00000581525 C16orf86Q6ZW13 317 aa15.16■□□□□ 0.02
SNORD55-201ENST00000581525 PROCA1Q8NCQ7 364 aaPredicted RBP15.16■□□□□ 0.02
SNORD55-201ENST00000581525 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
SNORD55-201ENST00000581525 ZBTB21Q9ULJ3 1066 aa15.16■□□□□ 0.02
SNORD55-201ENST00000581525 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
SNORD55-201ENST00000581525 GUCY1A2P33402 732 aa15.15■□□□□ 0.02
SNORD55-201ENST00000581525 CRHR2Q13324 411 aa15.15■□□□□ 0.02
SNORD55-201ENST00000581525 ALX1Q15699 326 aa15.15■□□□□ 0.02
SNORD55-201ENST00000581525 CERKLQ49MI3 558 aaPredicted RBP15.15■□□□□ 0.02
SNORD55-201ENST00000581525 ZNF296Q8WUU4 475 aaPredicted RBP15.15■□□□□ 0.02
SNORD55-201ENST00000581525 AS3MTQ9HBK9 375 aa15.15■□□□□ 0.02
SNORD55-201ENST00000581525 EPB41L4AQ9HCS5 686 aaPredicted RBP15.15■□□□□ 0.02
SNORD55-201ENST00000581525 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.15■□□□□ 0.02
SNORD55-201ENST00000581525 ARPP21Q9UBL0 812 aaPredicted RBP15.15■□□□□ 0.02
SNORD55-201ENST00000581525 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
SNORD55-201ENST00000581525 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 TLR2O60603 784 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 CYP2D6P10635 497 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 CDK8P49336 464 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 BACE1P56817 501 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 SPP2Q13103 211 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 SHROOM1Q2M3G4 852 aaPredicted RBP15.14■□□□□ 0.01
SNORD55-201ENST00000581525 CCDC84Q86UT8 332 aaPredicted RBP15.14■□□□□ 0.01
SNORD55-201ENST00000581525 IFNL3Q8IZI9 196 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 DDRGK1Q96HY6 314 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 CCDC17Q96LX7 622 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 ZFYVE28Q9HCC9 887 aa15.14■□□□□ 0.01
SNORD55-201ENST00000581525 ROBO3Q96MS0 1386 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 SMIM22K7EJ46 135 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 PDHXO00330 501 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 FKTNO75072 461 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 GH2P01242 217 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 SDSP20132 328 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 TAF1CQ15572 869 aaPredicted RBP15.13■□□□□ 0.01
SNORD55-201ENST00000581525 ABCB5Q2M3G0 1257 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 C17orf99Q6UX52 265 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 DYNLL2Q96FJ2 89 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
SNORD55-201ENST00000581525 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 CYP2D7A0A087X1C5 515 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 TRIM75PA6NK02 468 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 GDF11O95390 407 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 HOXA7P31268 230 aaPredicted RBP15.12■□□□□ 0.01
SNORD55-201ENST00000581525 TTC22Q5TAA0 569 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 CENPQQ7L2Z9 268 aaPredicted RBP15.12■□□□□ 0.01
SNORD55-201ENST00000581525 SIAH1Q8IUQ4 282 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 AMOTL1Q8IY63 956 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 C12orf42Q96LP6 360 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 FAM227BQ96M60 508 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 CABP5Q9NP86 173 aa15.12■□□□□ 0.01
SNORD55-201ENST00000581525 A0A0D9SFI3 127 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 TRIM6-TRIM34B2RNG4 842 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 HIP1O00291 1037 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 GSPT1P15170 499 aaKnown RBP15.11■□□□□ 0.01
SNORD55-201ENST00000581525 SP3Q02447 781 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 SLC44A5Q8NCS7 719 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 NACAP1Q9BZK3 213 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 KIAA1683Q9H0B3 1180 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
SNORD55-201ENST00000581525 PTPRFP10586 1907 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 FGRP09769 529 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 BCRP11274 1271 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 NMIQ13287 307 aaPredicted RBP15.1■□□□□ 0.01
SNORD55-201ENST00000581525 PKN2Q16513 984 aaKnown RBP15.1■□□□□ 0.01
SNORD55-201ENST00000581525 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 TMEM179Q6ZVK1 233 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 CTU1Q7Z7A3 348 aaKnown RBP15.1■□□□□ 0.01
SNORD55-201ENST00000581525 EMILIN3Q9NT22 766 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 CASP8AP2Q9UKL3 1982 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 ZMYM6O95789 1325 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
SNORD55-201ENST00000581525 RASA1P20936 1047 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 USP14P54578 494 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 HMGCS2P54868 508 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 SEPT2Q15019 361 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 TREML2Q5T2D2 321 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 VPS53Q5VIR6 699 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 CCDC129Q6ZRS4 1044 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 ZNF589Q86UQ0 364 aaPredicted RBP15.09■□□□□ 0.01
SNORD55-201ENST00000581525 TNS4Q8IZW8 715 aa15.09■□□□□ 0.01
SNORD55-201ENST00000581525 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNORD55-201ENST00000581525 BAZ2AQ9UIF9 1905 aaKnown RBP15.09■□□□□ 0.01
SNORD55-201ENST00000581525 FGAP02671 866 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 HSPD1P10809 573 aaKnown RBP15.08■□□□□ 0
SNORD55-201ENST00000581525 AKR1B1P15121 316 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 CAP1Q01518 475 aa15.08■□□□□ 0
SNORD55-201ENST00000581525 PABPC4Q13310 644 aaKnown RBP eCLIP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms