RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 NOVP48745 357 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 SCNN1DP51172 638 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 ZNF280AP59817 542 aaPredicted RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 GABPAQ06546 454 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 SEC23AQ15436 765 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 C16orf86Q6ZW13 317 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 METTL16Q86W50 562 aaKnown RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 BRF1Q92994 677 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 EHD4Q9H223 541 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 LY9Q9HBG7 655 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 MCM9Q9NXL9 1143 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 CHMP5Q9NZZ3 219 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 ZSWIM5Q9P217 1185 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 PPP1R1BQ9UD71 204 aaPredicted RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 COLQQ9Y215 455 aaPredicted RBP9.39□□□□□ -0.91
KPNB1-210ENST00000580573 ATAD5Q96QE3 1844 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 TCHHQ07283 1943 aa9.39□□□□□ -0.91
KPNB1-210ENST00000580573 PAPPA2Q9BXP8 1791 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 UTRNP46939 3433 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 MINDY4BA8MYZ0 360 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 F8W031 263 aaPredicted RBP9.38□□□□□ -0.91
KPNB1-210ENST00000580573 KIF3CO14782 793 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 KDM4AO75164 1064 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 RAD17O75943 681 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 SLC3A2P08195 630 aaKnown RBP9.38□□□□□ -0.91
KPNB1-210ENST00000580573 CYP2D6P10635 497 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 RASSF7Q02833 373 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 PDE4BQ07343 736 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 TNIP1Q15025 636 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 FKBP1CQ5VVH2 108 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 CIAPIN1Q6FI81 312 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 MAPKAPK5Q8IW41 473 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 SMARCC2Q8TAQ2 1214 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 JDP2Q8WYK2 163 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 ANKS1AQ92625 1134 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 ESR2Q92731 530 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 DPF2Q92785 391 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 FBXW7Q969H0 707 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 LLPHQ9BRT6 129 aaKnown RBP9.38□□□□□ -0.91
KPNB1-210ENST00000580573 OSBPL5Q9H0X9 879 aaPredicted RBP9.38□□□□□ -0.91
KPNB1-210ENST00000580573 SLKQ9H2G2 1235 aaPredicted RBP9.38□□□□□ -0.91
KPNB1-210ENST00000580573 INCENPQ9NQS7 918 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 TCP11L1Q9NUJ3 509 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 USP40Q9NVE5 1235 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 METRNQ9UJH8 293 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
KPNB1-210ENST00000580573 PCDHAC2Q9Y5I4 1007 aa9.38□□□□□ -0.91
KPNB1-210ENST00000580573 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 ENTPD3O75355 529 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 LMNB1P20700 586 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 RASA1P20936 1047 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
KPNB1-210ENST00000580573 PLCD1P51178 756 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 SCRN1Q12765 414 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 NFIAQ12857 509 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 CFAP100Q494V2 611 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 SMYD5Q6GMV2 418 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 APOA5Q6Q788 366 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 CHST3Q7LGC8 479 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 LRRC2Q9BYS8 371 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 DHX36Q9H2U1 1008 aaKnown RBP9.37□□□□□ -0.91
KPNB1-210ENST00000580573 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 BRPF3Q9ULD4 1205 aa9.37□□□□□ -0.91
KPNB1-210ENST00000580573 SCN4AP35499 1836 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 CTDNEP1O95476 244 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 HSP90AA1P07900 732 aaKnown RBP9.36□□□□□ -0.91
KPNB1-210ENST00000580573 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
KPNB1-210ENST00000580573 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 NOL8Q76FK4 1167 aaKnown RBP9.36□□□□□ -0.91
KPNB1-210ENST00000580573 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 AMOTL1Q8IY63 956 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 ENAHQ8N8S7 591 aaPredicted RBP9.36□□□□□ -0.91
KPNB1-210ENST00000580573 CHMP4CQ96CF2 233 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 PRMT6Q96LA8 375 aaPredicted RBP9.36□□□□□ -0.91
KPNB1-210ENST00000580573 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 SENP2Q9HC62 589 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 CNTNAP1P78357 1384 aa9.36□□□□□ -0.91
KPNB1-210ENST00000580573 TNKSO95271 1327 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 ZNF541Q9H0D2 1346 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 BRD1O95696 1058 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 YBX3P16989 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
KPNB1-210ENST00000580573 CDK8P49336 464 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 NUCB2P80303 420 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 SART3Q15020 963 aaKnown RBP9.35□□□□□ -0.91
KPNB1-210ENST00000580573 NTRK3Q16288 839 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
KPNB1-210ENST00000580573 FAM83AQ86UY5 434 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms