RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 INHAP05111 366 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 BACE1P56817 501 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 TTF1Q15361 905 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ZYXQ15942 572 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 RPAP2Q8IXW5 612 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 NKX2-3Q8TAU0 364 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 RCAN3Q9UKA8 241 aa11.19□□□□□ -0.62
CDK5RAP3-211ENST00000578996 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 USP17L10C9JJH3 530 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GOLIM4O00461 696 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GH2P01242 217 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 POLR3DP05423 398 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 RAB3GAP1Q15042 981 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 SLC9C2Q5TAH2 1124 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 SHISA4Q96DD7 197 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 FEZ1Q99689 392 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 WDR18Q9BV38 432 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 FOCADQ5VW36 1801 aa11.18□□□□□ -0.62
CDK5RAP3-211ENST00000578996 MGAMO43451 1857 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ZNF532Q9HCE3 1301 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 C19orf81C9J6K1 198 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PEX10O60683 326 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GJB1P08034 283 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GJA8P48165 433 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CERKLQ49MI3 558 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 TTC6Q86TZ1 520 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CCAR1Q8IX12 1150 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 SIRT2Q8IXJ6 389 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 U2AF1L4Q8WU68 220 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 DPF3Q92784 378 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GINM1Q9NU53 330 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 SERPINB13Q9UIV8 391 aa11.17□□□□□ -0.62
CDK5RAP3-211ENST00000578996 MPHOSPH10O00566 681 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 RAB11FIP3O75154 756 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PDE6AP16499 860 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PLCD1P51178 756 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 HERVK_113P62684 666 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 IRF5Q13568 498 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 ABCB5Q2M3G0 1257 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PXYLP1Q8TE99 480 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 SDR42E1Q8WUS8 393 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 RIOK1Q9BRS2 568 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CWC22Q9HCG8 908 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 CABP5Q9NP86 173 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 MCM9Q9NXL9 1143 aa11.16□□□□□ -0.62
CDK5RAP3-211ENST00000578996 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 TFRCP02786 760 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 HABP4Q5JVS0 413 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 C20orf194Q5TEA3 1177 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 TMED8Q6PL24 325 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 LCORLQ8N3X6 602 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 DEFB118Q96PH6 123 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 EHD4Q9H223 541 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.62
CDK5RAP3-211ENST00000578996 KIAA0100Q14667 2235 aaKnown RBP11.15□□□□□ -0.63
CDK5RAP3-211ENST00000578996 MYH1P12882 1939 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 H0YGN5 161 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 SGPL1O95470 568 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 HMGCRP04035 888 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 CYP2B6P20813 491 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 PDE3AQ14432 1141 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 SLFNL1Q499Z3 407 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 HTATIP2Q9BUP3 242 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 MORF4L1Q9UBU8 362 aa11.14□□□□□ -0.63
CDK5RAP3-211ENST00000578996 NAV1Q8NEY1 1877 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 SMARCA5O60264 1052 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 MBD4O95243 580 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 SHMT1P34896 483 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 USP14P54578 494 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 ERVK-9P63128 1117 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 ERVK-24P63145 666 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 EVX2Q03828 476 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 TRIM32Q13049 653 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 ACER1Q8TDN7 264 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
CDK5RAP3-211ENST00000578996 LRRCC1Q9C099 1032 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms