RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MAP3K2Q9Y2U5 619 aa4.85□□□□□ -1.63
SMARCE1-215ENST00000578995 PCDHB11Q9Y5F2 797 aa4.85□□□□□ -1.63
SMARCE1-215ENST00000578995 UTYO14607 1347 aa4.85□□□□□ -1.63
SMARCE1-215ENST00000578995 PTPRCP08575 1304 aa4.85□□□□□ -1.63
SMARCE1-215ENST00000578995 COL4A5P29400 1685 aa4.85□□□□□ -1.63
SMARCE1-215ENST00000578995 UTRNP46939 3433 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 ECM29Q5VYK3 1845 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 DOCK2Q92608 1830 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 A0A1W2PNR3 127 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 F6X3S4 739 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 SERPINB2P05120 415 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 RLBP1P12271 317 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 TRIM27P14373 513 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 PLA2G4AP47712 749 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 AIMP1Q12904 312 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 CWF19L2Q2TBE0 894 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 CRY2Q49AN0 593 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 SLC10A5Q5PT55 438 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 SHISA2Q6UWI4 295 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 PRR23CQ6ZRP0 262 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 SYNE4Q8N205 404 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 NLGN2Q8NFZ4 835 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 DNAAF4Q8WXU2 420 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 ARHGAP45Q92619 1136 aa4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 ZNF330Q9Y3S2 320 aaPredicted RBP4.84□□□□□ -1.63
SMARCE1-215ENST00000578995 MYH7P12883 1935 aa4.84□□□□□ -1.64
SMARCE1-215ENST00000578995 CDK5RAP2Q96SN8 1893 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 RTL9Q8NET4 1388 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 KIF16BQ96L93 1317 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 CDHR2Q9BYE9 1310 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 KIAA1324LA8MWY0 1029 aaPredicted RBP4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 ATP4AP20648 1035 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 GPTP24298 496 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 GCKRQ14397 625 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 ARSJQ5FYB0 599 aaPredicted RBP4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 INTS3Q68E01 1043 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 KIF6Q6ZMV9 814 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 LINS1Q8NG48 757 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 EPS8L1Q8TE68 723 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 TNFRSF25Q93038 417 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 YTHDC1Q96MU7 727 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 ARXQ96QS3 562 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 MYD88Q99836 296 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 STK31Q9BXU1 1019 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 SMC4Q9NTJ3 1288 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 NOB1Q9ULX3 412 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 NIP7Q9Y221 180 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 ADAMTSL1Q8N6G6 1762 aa4.83□□□□□ -1.64
SMARCE1-215ENST00000578995 LILRB5O75023 590 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 PCCAP05165 728 aaPredicted RBP4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 FSTP19883 344 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 MCCD1P59942 119 aaPredicted RBP4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 FOXO4P98177 505 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 FKBP5Q13451 457 aaPredicted RBP4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 PARP10Q53GL7 1025 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 HSP90AB3PQ58FF7 597 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 EPHA10Q5JZY3 1008 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 C20orf194Q5TEA3 1177 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 ATF7IPQ6VMQ6 1270 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 BICDL1Q6ZP65 573 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 CCDC191Q8NCU4 936 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 AIDAQ96BJ3 306 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 SETDB2Q96T68 719 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 SYT17Q9BSW7 474 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 PLA2G12BQ9BX93 195 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 CHMP4AQ9BY43 222 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 RCAN3Q9UKA8 241 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 CD2APQ9Y5K6 639 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 GJA3Q9Y6H8 435 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 AK9Q5TCS8 1911 aa4.82□□□□□ -1.64
SMARCE1-215ENST00000578995 SH3TC1Q8TE82 1336 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 ZBBXA8MT70 800 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 ALDH1L1O75891 902 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 DDX58O95786 925 aaKnown RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 MYCP01106 439 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 CSF1RP07333 972 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 C8AP07357 584 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 NBPF7P0C2Y1 421 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 SRGNP10124 158 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 DPEP1P16444 411 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 CHRNA5P30532 468 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 HOXA10P31260 410 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 SF3B3Q15393 1217 aaKnown RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 RABL6Q3YEC7 729 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 SAMD5Q5TGI4 173 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 C20orf204Q6ZNR8 217 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 ANKRD44Q8N8A2 993 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 CNBD1Q8NA66 436 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 ZBTB38Q8NAP3 1195 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 C7orf43Q8WVR3 580 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 WFDC12Q8WWY7 111 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 ZNF592Q92610 1267 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 JARID2Q92833 1246 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 FAM89AQ96GI7 184 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 BRIP1Q9BX63 1249 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 POLR3EQ9NVU0 708 aa4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 CWC25Q9NXE8 425 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-215ENST00000578995 PARP3Q9Y6F1 533 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms