RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 FXR1P51114 621 aaKnown RBP eCLIP10.91□□□□□ -0.66
GGA3-207ENST00000578896 BACE1P56817 501 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 EVX2Q03828 476 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
GGA3-207ENST00000578896 FAM110CQ1W6H9 321 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 CHRDL2Q6WN34 429 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 UBE2Q1Q7Z7E8 422 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 FOXP4Q8IVH2 680 aaPredicted RBP10.91□□□□□ -0.66
GGA3-207ENST00000578896 COA7Q96BR5 231 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 ZNF512BQ96KM6 892 aaPredicted RBP10.91□□□□□ -0.66
GGA3-207ENST00000578896 WDR18Q9BV38 432 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 DHX36Q9H2U1 1008 aaKnown RBP10.91□□□□□ -0.66
GGA3-207ENST00000578896 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 FARP2O94887 1054 aaPredicted RBP10.9□□□□□ -0.66
GGA3-207ENST00000578896 GH2P01242 217 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 ASNSP08243 561 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 CYP2B6P20813 491 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 USP5P45974 858 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
GGA3-207ENST00000578896 IRF5Q13568 498 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 Q3C1V9 767 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 TMOD4Q9NZQ9 345 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 GJD2Q9UKL4 321 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
GGA3-207ENST00000578896 USP17L10C9JJH3 530 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 HLA-DOAP06340 250 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 GCLCP48506 637 aaPredicted RBP10.89□□□□□ -0.67
GGA3-207ENST00000578896 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
GGA3-207ENST00000578896 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 METTL16Q86W50 562 aaKnown RBP10.89□□□□□ -0.67
GGA3-207ENST00000578896 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 PXYLP1Q8TE99 480 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 DIS3LQ8TF46 1054 aaKnown RBP10.89□□□□□ -0.67
GGA3-207ENST00000578896 EDC3Q96F86 508 aaKnown RBP10.89□□□□□ -0.67
GGA3-207ENST00000578896 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 COG6Q9Y2V7 657 aa10.89□□□□□ -0.67
GGA3-207ENST00000578896 ZBED9Q6R2W3 1325 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 PLCD1P51178 756 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 HERVK_113P62684 666 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 MAP3K12Q12852 859 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 SIRT2Q8IXJ6 389 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 ACER1Q8TDN7 264 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 PAWRQ96IZ0 340 aaKnown RBP10.88□□□□□ -0.67
GGA3-207ENST00000578896 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
GGA3-207ENST00000578896 TBC1D2Q9BYX2 928 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.88□□□□□ -0.67
GGA3-207ENST00000578896 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
GGA3-207ENST00000578896 RBPJLQ9UBG7 517 aa10.88□□□□□ -0.67
GGA3-207ENST00000578896 LAMA3Q16787 3333 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 C19orf81C9J6K1 198 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 GOLIM4O00461 696 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 CHGBP05060 677 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 CYP2D6P10635 497 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 HOXA7P31268 230 aaPredicted RBP10.87□□□□□ -0.67
GGA3-207ENST00000578896 RAB3GAP1Q15042 981 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 USP17L2Q6R6M4 530 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 GPRC5AQ8NFJ5 357 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 TRIB2Q92519 343 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 RIOK1Q9BRS2 568 aaKnown RBP10.87□□□□□ -0.67
GGA3-207ENST00000578896 HTATIP2Q9BUP3 242 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 PORCNQ9H237 461 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 PAK6Q9NQU5 681 aaPredicted RBP10.87□□□□□ -0.67
GGA3-207ENST00000578896 MORF4L1Q9UBU8 362 aa10.87□□□□□ -0.67
GGA3-207ENST00000578896 MAGEB6P1A0A0J9YX57 407 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 HMGCRP04035 888 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 PDE6AP16499 860 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 SHMT1P34896 483 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 CCL14Q16627 93 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 CERKLQ49MI3 558 aaPredicted RBP10.86□□□□□ -0.67
GGA3-207ENST00000578896 SLC9C2Q5TAH2 1124 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 TATDN1Q6P1N9 297 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 FEZ1Q99689 392 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 CRISPLD2Q9H0B8 497 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 SERPINB13Q9UIV8 391 aa10.86□□□□□ -0.67
GGA3-207ENST00000578896 ZNF532Q9HCE3 1301 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 PRKAB2O43741 272 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 EVI5O60447 810 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 CNMDO75829 334 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 POLR3DP05423 398 aaPredicted RBP10.85□□□□□ -0.67
GGA3-207ENST00000578896 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 ERVK-24P63145 666 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 SEPT2Q15019 361 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 ABCB5Q2M3G0 1257 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 C20orf194Q5TEA3 1177 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 TTC6Q86TZ1 520 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 CLASRPQ8N2M8 674 aaKnown RBP10.85□□□□□ -0.67
GGA3-207ENST00000578896 LCORLQ8N3X6 602 aa10.85□□□□□ -0.67
GGA3-207ENST00000578896 SLC44A5Q8NCS7 719 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms