RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 GABPAQ06546 454 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CERKLQ49MI3 558 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 GBA2Q9HCG7 927 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CSADQ9Y600 493 aa13.34□□□□□ -0.27
CDK5RAP3-210ENST00000578733 CCDC85CA6NKD9 419 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ORC4O43929 436 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 CTNND1O60716 968 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PSMA5P28066 241 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PRKG1Q13976 671 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 RRP12Q5JTH9 1297 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TATDN1Q6P1N9 297 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ANKRD13AQ8IZ07 590 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 STK11IPQ8N1F8 1099 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ESR2Q92731 530 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 DYNLL2Q96FJ2 89 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PHIPQ8WWQ0 1821 aa13.33□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TSPY2A6NKD2 308 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 MPHOSPH10O00566 681 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 RANBP6O60518 1105 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ASNSP08243 561 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 HMGB1P09429 215 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ANAPC15P60006 121 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 MAP3K11Q16584 847 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ABCB5Q2M3G0 1257 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PTPRFP10586 1907 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 E7EWF7 191 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 USP2O75604 605 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 FGRP09769 529 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SHMT1P34896 483 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 CAP2P40123 477 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 IQCA1Q86XH1 822 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TBC1D10CQ8IV04 446 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 KCNB2Q92953 911 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TBC1D2Q9BYX2 928 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 C22orf23Q9BZE7 217 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 DNAJC18Q9H819 358 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ZNF112Q9UJU3 913 aa13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ERICH2A1L162 156 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 CA12O43570 354 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PRDM1O75626 825 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 NOL9Q5SY16 702 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 CAPNS2Q96L46 248 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 AS3MTQ9HBK9 375 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PLIN4Q96Q06 1357 aa13.3□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PHF20L1A8MW92 1017 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 GDF11O95390 407 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 RASA1P20936 1047 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 MCM5P33992 734 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 MAP2K2P36507 400 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TFAP4Q01664 338 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 EVX2Q03828 476 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 DLK2Q6UY11 383 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 UBAC1Q9BSL1 405 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ZBTB21Q9ULJ3 1066 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 NEDD4P46934 1319 aa13.29□□□□□ -0.28
CDK5RAP3-210ENST00000578733 B4E1Z4 1266 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 KDM4AO75164 1064 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 AKR1B1P15121 316 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 INPP5BP32019 993 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 HUNKP57058 714 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 RAB3GAP1Q15042 981 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 BLOC1S2Q6QNY1 142 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 NEDD1Q8NHV4 660 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 MTA3Q9BTC8 594 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 NBPF3Q9H094 633 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 ARHGEF10LQ9HCE6 1279 aa13.28□□□□□ -0.28
CDK5RAP3-210ENST00000578733 WDR19Q8NEZ3 1342 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms