RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 FOXN1O15353 648 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 GH2P01242 217 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 CHMLP26374 656 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 TATDN1Q6P1N9 297 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 CLEC10AQ8IUN9 316 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 BRI3BPQ8WY22 251 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 NAPBQ9H115 298 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 ZHX2Q9Y6X8 837 aa25.96■■□□□ 1.75
CDC42EP4-203ENST00000578516 PTPN18Q99952 460 aa25.95■■□□□ 1.74
CDC42EP4-203ENST00000578516 TACC3Q9Y6A5 838 aa25.95■■□□□ 1.74
CDC42EP4-203ENST00000578516 ROBO3Q96MS0 1386 aa25.95■■□□□ 1.74
CDC42EP4-203ENST00000578516 CCL15-CCL14A0A0B4J2E2 113 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 HSPD1P10809 573 aaKnown RBP25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 CDK8P49336 464 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 PPATQ06203 517 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 CCL15Q16663 113 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 SBK1Q52WX2 424 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 GIMAP6Q6P9H5 292 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 C16orf86Q6ZW13 317 aa25.94■■□□□ 1.74
CDC42EP4-203ENST00000578516 MANSC4A6NHS7 340 aaPredicted RBP25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 TRIM75PA6NK02 468 aa25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 AKR1B1P15121 316 aa25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 MAP2K1Q02750 393 aaPredicted RBP25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 CTDSPL2Q05D32 466 aa25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 CERKLQ49MI3 558 aaPredicted RBP25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 INCENPQ9NQS7 918 aa25.93■■□□□ 1.74
CDC42EP4-203ENST00000578516 HIP1O00291 1037 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 PRDM1O75626 825 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 GUCY1A2P33402 732 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 AMOTL1Q8IY63 956 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 RNF186Q9NXI6 227 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 KCNH4Q9UQ05 1017 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 AFG3L2Q9Y4W6 797 aa25.92■■□□□ 1.74
CDC42EP4-203ENST00000578516 CASP8AP2Q9UKL3 1982 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 TRPA1O75762 1119 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 PPARAQ07869 468 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 MOGSQ13724 837 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 ABCB5Q2M3G0 1257 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 BMP2KLQ5H9B9 411 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 NACAP1Q9BZK3 213 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 R3HDMLQ9H3Y0 253 aa25.91■■□□□ 1.74
CDC42EP4-203ENST00000578516 MPHOSPH10O00566 681 aaKnown RBP25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 TM4SF4P48230 202 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 HAND2P61296 217 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 SREBF2Q12772 1141 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 SPP2Q13103 211 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 SEPT2Q15019 361 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 TICAM2Q86XR7 235 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 IFNL1Q8IU54 200 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 FAM43AQ8N2R8 423 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 MYH4Q9Y623 1939 aa25.9■■□□□ 1.74
CDC42EP4-203ENST00000578516 ZSWIM8A7E2V4 1837 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 USP17L5A8MUK1 530 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 FGAP02671 866 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 ASNSP08243 561 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 GTF2A2P52657 109 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 SNAPC2Q13487 334 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 RAB3GAP1Q15042 981 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 NBPF3Q9H094 633 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 SWAP70Q9UH65 585 aa25.89■■□□□ 1.74
CDC42EP4-203ENST00000578516 TESPA1A2RU30 521 aaPredicted RBP25.88■■□□□ 1.73
CDC42EP4-203ENST00000578516 BTBD19C9JJ37 291 aa25.88■■□□□ 1.73
CDC42EP4-203ENST00000578516 HSPA8P11142 646 aaKnown RBP25.88■■□□□ 1.73
CDC42EP4-203ENST00000578516 RASA1P20936 1047 aa25.88■■□□□ 1.73
CDC42EP4-203ENST00000578516 TBC1D8O95759 1140 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 PTH1RQ03431 593 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 MTMR2Q13614 643 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 ALX1Q15699 326 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 ZYXQ15942 572 aaKnown RBP25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 GADL1Q6ZQY3 521 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 NKX2-3Q8TAU0 364 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 ACER1Q8TDN7 264 aa25.87■■□□□ 1.73
CDC42EP4-203ENST00000578516 A0A0G2JLL6 359 aaPredicted RBP25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 CETPP11597 493 aa25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 PRRT2Q7Z6L0 340 aaPredicted RBP25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 TBC1D10CQ8IV04 446 aa25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 ZNF280CQ8ND82 737 aa25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 BEGAINQ9BUH8 593 aa25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 RAD50Q92878 1312 aa25.86■■□□□ 1.73
CDC42EP4-203ENST00000578516 SGSM2O43147 1006 aa25.85■■□□□ 1.73
CDC42EP4-203ENST00000578516 HMGCS2P54868 508 aa25.85■■□□□ 1.73
CDC42EP4-203ENST00000578516 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.85■■□□□ 1.73
CDC42EP4-203ENST00000578516 CXCL11O14625 94 aa25.84■■□□□ 1.73
CDC42EP4-203ENST00000578516 LBX1P52954 281 aa25.84■■□□□ 1.73
CDC42EP4-203ENST00000578516 TREML2Q5T2D2 321 aa25.84■■□□□ 1.73
CDC42EP4-203ENST00000578516 GPAT2Q6NUI2 795 aa25.84■■□□□ 1.73
CDC42EP4-203ENST00000578516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.84■■□□□ 1.73
CDC42EP4-203ENST00000578516 MFAP1P55081 439 aaKnown RBP25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 FAM47AQ5JRC9 791 aa25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 ESYT1Q9BSJ8 1104 aa25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 WDR18Q9BV38 432 aa25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 MKNK2Q9HBH9 465 aa25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 CABP5Q9NP86 173 aa25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 ZMYM6O95789 1325 aa25.83■■□□□ 1.73
CDC42EP4-203ENST00000578516 A0A1W2PRG0 241 aa25.82■■□□□ 1.72
CDC42EP4-203ENST00000578516 CRHR2Q13324 411 aa25.82■■□□□ 1.72
CDC42EP4-203ENST00000578516 RUFY2Q8WXA3 655 aa25.82■■□□□ 1.72
CDC42EP4-203ENST00000578516 DSCC1Q9BVC3 393 aa25.82■■□□□ 1.72
CDC42EP4-203ENST00000578516 AS3MTQ9HBK9 375 aa25.82■■□□□ 1.72
CDC42EP4-203ENST00000578516 TMEM179Q6ZVK1 233 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms