RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 KRT23Q9C075 422 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 CNNM2Q9H8M5 875 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 ZNF112Q9UJU3 913 aa10.1□□□□□ -0.79
PRPF8-213ENST00000576407 B4E1Z4 1266 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 RANBP6O60518 1105 aaKnown RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 KDM4AO75164 1064 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 GDF11O95390 407 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 INPP5BP32019 993 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 CAP2P40123 477 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 JAG1P78504 1218 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 TRDNQ13061 729 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 SHROOM1Q2M3G4 852 aaPredicted RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 FAM47AQ5JRC9 791 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 MOB2Q70IA6 237 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 RALYLQ86SE5 291 aaKnown RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 NCOA7Q8NI08 942 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 ESR2Q92731 530 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 ZKSCAN4Q969J2 545 aaPredicted RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 CCDC17Q96LX7 622 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 NEK1Q96PY6 1258 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 WRNIP1Q96S55 665 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 GBA2Q9HCG7 927 aaPredicted RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 ANGEL1Q9UNK9 670 aaKnown RBP10.09□□□□□ -0.79
PRPF8-213ENST00000576407 MYH8P13535 1937 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 PAPPA2Q9BXP8 1791 aa10.09□□□□□ -0.79
PRPF8-213ENST00000576407 TSPY2A6NKD2 308 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 MPHOSPH10O00566 681 aaKnown RBP10.08□□□□□ -0.8
PRPF8-213ENST00000576407 CTNND1O60716 968 aaKnown RBP10.08□□□□□ -0.8
PRPF8-213ENST00000576407 TSPY3P0CV98 308 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 TSPY8P0CW00 308 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 AKR1B1P15121 316 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 IREB2P48200 963 aaKnown RBP10.08□□□□□ -0.8
PRPF8-213ENST00000576407 FKBP1BP68106 108 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 MAP3K9P80192 1104 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 TFAP4Q01664 338 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 MAP3K11Q16584 847 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 ABCB5Q2M3G0 1257 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.08□□□□□ -0.8
PRPF8-213ENST00000576407 CYB5R4Q7L1T6 521 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 ARMC9Q7Z3E5 817 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 MB21D2Q8IYB1 491 aaPredicted RBP10.08□□□□□ -0.8
PRPF8-213ENST00000576407 C2orf69Q8N8R5 385 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 IL17RAQ96F46 866 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 KIF2CQ99661 725 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 ZSWIM5Q9P217 1185 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 TRPM7Q96QT4 1865 aa10.08□□□□□ -0.8
PRPF8-213ENST00000576407 OTOFQ9HC10 1997 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 PLIN4Q96Q06 1357 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 UBE2Q2LH0YL09 131 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 GH2P01242 217 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
PRPF8-213ENST00000576407 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
PRPF8-213ENST00000576407 PSMA5P28066 241 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 NT5C2P49902 561 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 ANTXR2P58335 489 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 VGLL4Q14135 290 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 LDLRAD1Q5T700 205 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 TMEM179Q6ZVK1 233 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 CHST3Q7LGC8 479 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 ANKRD13AQ8IZ07 590 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 NEDD1Q8NHV4 660 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
PRPF8-213ENST00000576407 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 CABP5Q9NP86 173 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
PRPF8-213ENST00000576407 ZBTB21Q9ULJ3 1066 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 CEP350Q5VT06 3117 aa10.07□□□□□ -0.8
PRPF8-213ENST00000576407 DOCK1Q14185 1865 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 GREB1LQ9C091 1923 aaPredicted RBP10.06□□□□□ -0.8
PRPF8-213ENST00000576407 ATAD5Q96QE3 1844 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 IGKV6D-41A0A0C4DH26 115 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 PRC1O43663 620 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 NMT2O60551 498 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 ASNSP08243 561 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 CPA1P15085 419 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 GUCY1A2P33402 732 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 MCM5P33992 734 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 EXOSC10Q01780 885 aaKnown RBP10.06□□□□□ -0.8
PRPF8-213ENST00000576407 SEPT2Q15019 361 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 RAB3GAP1Q15042 981 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 NOL9Q5SY16 702 aaKnown RBP10.06□□□□□ -0.8
PRPF8-213ENST00000576407 BLOC1S2Q6QNY1 142 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 RUFY3Q7L099 469 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
PRPF8-213ENST00000576407 IQCA1Q86XH1 822 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 CLMNQ96JQ2 1002 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 ZKSCAN3Q9BRR0 538 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
PRPF8-213ENST00000576407 TM6SF1Q9BZW5 370 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 GINM1Q9NU53 330 aa10.06□□□□□ -0.8
PRPF8-213ENST00000576407 TCP11L1Q9NUJ3 509 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms