RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 BRF1Q92994 677 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 CCDC17Q96LX7 622 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 ZSCAN10Q96SZ4 725 aaPredicted RBP19.39■□□□□ 0.69
ERCC4-208ENST00000576348 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 ALDH8A1Q9H2A2 487 aaPredicted RBP19.39■□□□□ 0.69
ERCC4-208ENST00000576348 LAMA4Q16363 1823 aa19.39■□□□□ 0.69
ERCC4-208ENST00000576348 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
ERCC4-208ENST00000576348 DDX60LQ5H9U9 1706 aaKnown RBP19.38■□□□□ 0.69
ERCC4-208ENST00000576348 SYNE3Q6ZMZ3 975 aa19.38■□□□□ 0.69
ERCC4-208ENST00000576348 MIGA2Q7L4E1 593 aa19.38■□□□□ 0.69
ERCC4-208ENST00000576348 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
ERCC4-208ENST00000576348 CABP5Q9NP86 173 aa19.38■□□□□ 0.69
ERCC4-208ENST00000576348 BAZ2AQ9UIF9 1905 aaKnown RBP19.38■□□□□ 0.69
ERCC4-208ENST00000576348 ANGEL1Q9UNK9 670 aaKnown RBP19.38■□□□□ 0.69
ERCC4-208ENST00000576348 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
ERCC4-208ENST00000576348 LAMB1P07942 1786 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 TNKSO95271 1327 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 CCDC69A6NI79 296 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 POTECB2RU33 542 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 SH2B2O14492 632 aaPredicted RBP19.37■□□□□ 0.69
ERCC4-208ENST00000576348 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
ERCC4-208ENST00000576348 NF2P35240 595 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 COL9A3Q14050 684 aaPredicted RBP19.37■□□□□ 0.69
ERCC4-208ENST00000576348 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 USP48Q86UV5 1035 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 METTL16Q86W50 562 aaKnown RBP19.37■□□□□ 0.69
ERCC4-208ENST00000576348 CDAN1Q8IWY9 1227 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 TMTC2Q8N394 836 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 ZSCAN31Q96LW9 406 aaPredicted RBP19.37■□□□□ 0.69
ERCC4-208ENST00000576348 TEPSINQ96N21 525 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 TBC1D2Q9BYX2 928 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 ECM29Q5VYK3 1845 aa19.37■□□□□ 0.69
ERCC4-208ENST00000576348 ADM5C9JUS6 153 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 TBC1D12O60347 775 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 CD2BP2O95400 341 aaKnown RBP19.36■□□□□ 0.69
ERCC4-208ENST00000576348 AKR1B1P15121 316 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 TOB2Q14106 344 aaPredicted RBP19.36■□□□□ 0.69
ERCC4-208ENST00000576348 ABCB5Q2M3G0 1257 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 IFIT1BQ5T764 474 aaKnown RBP19.36■□□□□ 0.69
ERCC4-208ENST00000576348 NBPF12Q5TAG4 269 aaPredicted RBP19.36■□□□□ 0.69
ERCC4-208ENST00000576348 PRAMEF18Q5VWM3 479 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 NEDD1Q8NHV4 660 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 LARP6Q9BRS8 491 aaKnown RBP19.36■□□□□ 0.69
ERCC4-208ENST00000576348 DNAJC18Q9H819 358 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 WDR90Q96KV7 1748 aa19.36■□□□□ 0.69
ERCC4-208ENST00000576348 FOCADQ5VW36 1801 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 KLF18A0A0U1RQI7 1052 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 GDF11O95390 407 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 APOBRQ0VD83 1088 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 CDC37L1Q7L3B6 337 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 NKX2-3Q8TAU0 364 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 ZNF341Q9BYN7 854 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 NMRK2Q9NPI5 230 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 SH2B1Q9NRF2 756 aaPredicted RBP19.35■□□□□ 0.69
ERCC4-208ENST00000576348 PGAP2Q9UHJ9 254 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 MYH1P12882 1939 aa19.35■□□□□ 0.69
ERCC4-208ENST00000576348 GOLGA8BA8MQT2 603 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 SLURP2P0DP57 97 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 LIFRP42702 1097 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 FBXL16Q8N461 479 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 IGDCC4Q8TDY8 1250 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 IPO9Q96P70 1041 aaKnown RBP19.34■□□□□ 0.69
ERCC4-208ENST00000576348 KAT14Q9H8E8 782 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 LY9Q9HBG7 655 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 GPHNQ9NQX3 736 aaPredicted RBP19.34■□□□□ 0.69
ERCC4-208ENST00000576348 TCP11L1Q9NUJ3 509 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 STX8Q9UNK0 236 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 SLC12A7Q9Y666 1083 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 CDK5RAP2Q96SN8 1893 aa19.34■□□□□ 0.69
ERCC4-208ENST00000576348 NMT2O60551 498 aa19.33■□□□□ 0.68
ERCC4-208ENST00000576348 ATP2B2Q01814 1243 aa19.33■□□□□ 0.68
ERCC4-208ENST00000576348 TMEM179Q6ZVK1 233 aa19.33■□□□□ 0.68
ERCC4-208ENST00000576348 CATIPQ7Z7H3 387 aa19.33■□□□□ 0.68
ERCC4-208ENST00000576348 ENAHQ8N8S7 591 aaPredicted RBP19.33■□□□□ 0.68
ERCC4-208ENST00000576348 TMX3Q96JJ7 454 aa19.33■□□□□ 0.68
ERCC4-208ENST00000576348 SCN4AP35499 1836 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 GH2P01242 217 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 STK3Q13188 491 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 RAB3GAP1Q15042 981 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 DGKHQ86XP1 1220 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 CHMP4CQ96CF2 233 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 CDCA5Q96FF9 252 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 AGXT2Q9BYV1 514 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 GLIS2Q9BZE0 524 aaPredicted RBP19.32■□□□□ 0.68
ERCC4-208ENST00000576348 SLKQ9H2G2 1235 aaPredicted RBP19.32■□□□□ 0.68
ERCC4-208ENST00000576348 TPCN1Q9ULQ1 816 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 PLIN4Q96Q06 1357 aa19.32■□□□□ 0.68
ERCC4-208ENST00000576348 ZBTB43O43298 467 aa19.31■□□□□ 0.68
ERCC4-208ENST00000576348 PRKG1Q13976 671 aa19.31■□□□□ 0.68
ERCC4-208ENST00000576348 TTLL12Q14166 644 aaPredicted RBP19.31■□□□□ 0.68
ERCC4-208ENST00000576348 SEC23AQ15436 765 aa19.31■□□□□ 0.68
ERCC4-208ENST00000576348 MAP1SQ66K74 1059 aaPredicted RBP19.31■□□□□ 0.68
ERCC4-208ENST00000576348 CEP95Q96GE4 821 aa19.31■□□□□ 0.68
ERCC4-208ENST00000576348 KANSL2Q9H9L4 492 aa19.31■□□□□ 0.68
ERCC4-208ENST00000576348 GPBP1L1Q9HC44 474 aaPredicted RBP19.31■□□□□ 0.68
ERCC4-208ENST00000576348 PPP1R12BO60237 982 aaPredicted RBP19.3■□□□□ 0.68
ERCC4-208ENST00000576348 TTLL1O95922 423 aa19.3■□□□□ 0.68
ERCC4-208ENST00000576348 POTEIP0CG38 1075 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms