RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 SLC26A6Q9BXS9 759 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 FER1L6Q2WGJ9 1857 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 NAV1Q8NEY1 1877 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 MYH2Q9UKX2 1941 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 USP17L12C9JPN9 530 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 USP17L21D6R901 530 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 RANBP6O60518 1105 aaKnown RBP21.69■■□□□ 1.06
SPNS3-204ENST00000575194 PDE4BQ07343 736 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 STK11IPQ8N1F8 1099 aa21.69■■□□□ 1.06
SPNS3-204ENST00000575194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.69■■□□□ 1.06
SPNS3-204ENST00000575194 NR1I2O75469 434 aa21.68■■□□□ 1.06
SPNS3-204ENST00000575194 SF3A1Q15459 793 aaKnown RBP21.68■■□□□ 1.06
SPNS3-204ENST00000575194 CATIPQ7Z7H3 387 aa21.68■■□□□ 1.06
SPNS3-204ENST00000575194 CCAR1Q8IX12 1150 aaKnown RBP21.68■■□□□ 1.06
SPNS3-204ENST00000575194 AMOTL1Q8IY63 956 aa21.68■■□□□ 1.06
SPNS3-204ENST00000575194 A0A1W2PQ27 194 aa21.67■■□□□ 1.06
SPNS3-204ENST00000575194 A0A1W2PQ64 194 aa21.67■■□□□ 1.06
SPNS3-204ENST00000575194 A0A1W2PQD8 194 aa21.67■■□□□ 1.06
SPNS3-204ENST00000575194 DEXIO95424 95 aa21.67■■□□□ 1.06
SPNS3-204ENST00000575194 IL1R1P14778 569 aa21.67■■□□□ 1.06
SPNS3-204ENST00000575194 IFIT1BQ5T764 474 aaKnown RBP21.67■■□□□ 1.06
SPNS3-204ENST00000575194 FANCBQ8NB91 859 aa21.67■■□□□ 1.06
SPNS3-204ENST00000575194 FTOQ9C0B1 505 aaKnown RBP eCLIP21.67■■□□□ 1.06
SPNS3-204ENST00000575194 ZC3H12CQ9C0D7 883 aaKnown RBP21.67■■□□□ 1.06
SPNS3-204ENST00000575194 RBM28Q9NW13 759 aaKnown RBP21.67■■□□□ 1.06
SPNS3-204ENST00000575194 POLR3DP05423 398 aaPredicted RBP21.66■■□□□ 1.06
SPNS3-204ENST00000575194 SAFBQ15424 915 aaKnown RBP eCLIP21.66■■□□□ 1.06
SPNS3-204ENST00000575194 ENAHQ8N8S7 591 aaPredicted RBP21.66■■□□□ 1.06
SPNS3-204ENST00000575194 LINC00301Q8NCQ3 95 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 EYA3Q99504 573 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 CD209Q9NNX6 404 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 MROH7-TTC4A0A0A0MT08 1334 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 CYP2D7A0A087X1C5 515 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 KIF28PB7ZC32 967 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 DDAH1O94760 285 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 USP5P45974 858 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 PPP4CP60510 307 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 FAM160A1Q05DH4 1040 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 ADALQ6DHV7 355 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 SLF2Q8IX21 1173 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 SUPT20HQ8NEM7 779 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 TBC1D22AQ8WUA7 517 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 NUP133Q8WUM0 1156 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 MRPS27Q92552 414 aaKnown RBP21.66■■□□□ 1.06
SPNS3-204ENST00000575194 JAG2Q9Y219 1238 aa21.66■■□□□ 1.06
SPNS3-204ENST00000575194 RIMBP2O15034 1052 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 SPTLC2O15270 562 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 KINO60870 393 aaKnown RBP21.65■■□□□ 1.06
SPNS3-204ENST00000575194 TYRO3Q06418 890 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 CAMK4Q16566 473 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 FSIP1Q8NA03 581 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 AIFM3Q96NN9 605 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 MYH6P13533 1939 aa21.65■■□□□ 1.06
SPNS3-204ENST00000575194 ROBO3Q96MS0 1386 aa21.64■■□□□ 1.06
SPNS3-204ENST00000575194 ESPNB1AK53 854 aa21.64■■□□□ 1.06
SPNS3-204ENST00000575194 CAVIN2O95810 425 aa21.64■■□□□ 1.06
SPNS3-204ENST00000575194 U2AF2P26368 475 aaKnown RBP eCLIP21.64■■□□□ 1.06
SPNS3-204ENST00000575194 SASS6Q6UVJ0 657 aa21.64■■□□□ 1.06
SPNS3-204ENST00000575194 CRACR2BQ8N4Y2 399 aaPredicted RBP21.64■■□□□ 1.06
SPNS3-204ENST00000575194 JMYQ8N9B5 988 aa21.64■■□□□ 1.06
SPNS3-204ENST00000575194 RNF26Q9BY78 433 aaPredicted RBP21.64■■□□□ 1.06
SPNS3-204ENST00000575194 RTN4Q9NQC3 1192 aaKnown RBP21.64■■□□□ 1.06
SPNS3-204ENST00000575194 CLIC4Q9Y696 253 aa21.64■■□□□ 1.06
SPNS3-204ENST00000575194 NFKBIEO00221 500 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 AKAP17AQ02040 695 aaKnown RBP21.63■■□□□ 1.05
SPNS3-204ENST00000575194 KIAA2012Q0VF49 1180 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 VPS33BQ9H267 617 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 MCM9Q9NXL9 1143 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 PCDHA7Q9UN72 937 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 PLCG2P16885 1265 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 XBP1P17861 261 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 CCDC178Q5BJE1 867 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 NBPF11Q86T75 865 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 FAM200AQ8TCP9 573 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 COA1Q9GZY4 146 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 GJB4Q9NTQ9 266 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 CCDC39Q9UFE4 941 aa21.63■■□□□ 1.05
SPNS3-204ENST00000575194 MMP1P03956 469 aa21.62■■□□□ 1.05
SPNS3-204ENST00000575194 GOLPH3LQ9H4A5 285 aa21.62■■□□□ 1.05
SPNS3-204ENST00000575194 LTBP3Q9NS15 1303 aa21.61■■□□□ 1.05
SPNS3-204ENST00000575194 PRDM1O75626 825 aa21.61■■□□□ 1.05
SPNS3-204ENST00000575194 CKAP2LQ8IYA6 745 aa21.61■■□□□ 1.05
SPNS3-204ENST00000575194 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
SPNS3-204ENST00000575194 TAOK3Q9H2K8 898 aa21.61■■□□□ 1.05
SPNS3-204ENST00000575194 SLC39A14Q15043 492 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 AOC3Q16853 763 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 C12orf60Q5U649 245 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 ENGASEQ8NFI3 743 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 SH3RF3Q8TEJ3 882 aaPredicted RBP21.6■■□□□ 1.05
SPNS3-204ENST00000575194 FOXP1Q9H334 677 aaPredicted RBP21.6■■□□□ 1.05
SPNS3-204ENST00000575194 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
SPNS3-204ENST00000575194 MRVI1Q9Y6F6 885 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 CDK5RAP2Q96SN8 1893 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 TSPY2A6NKD2 308 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 PPP6R2O75170 966 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 YBX3P16989 372 aaKnown RBP eCLIP21.6■■□□□ 1.05
SPNS3-204ENST00000575194 SNW1Q13573 536 aaKnown RBP21.6■■□□□ 1.05
SPNS3-204ENST00000575194 DOK7Q18PE1 504 aa21.6■■□□□ 1.05
SPNS3-204ENST00000575194 ZSCAN30Q86W11 494 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms