RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ANKRD23Q86SG2 305 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 CHD1LQ86WJ1 897 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 SERPINB13Q9UIV8 391 aa10.49□□□□□ -0.73
SMG6-216ENST00000575176 CXCL11O14625 94 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 RNF113AO15541 343 aaKnown RBP10.48□□□□□ -0.73
SMG6-216ENST00000575176 GPAA1O43292 621 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 BCRP11274 1271 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 CETPP11597 493 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 GSPT1P15170 499 aaKnown RBP10.48□□□□□ -0.73
SMG6-216ENST00000575176 SH3D19Q5HYK7 790 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 C12orf60Q5U649 245 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 NOL10Q9BSC4 688 aaKnown RBP10.48□□□□□ -0.73
SMG6-216ENST00000575176 BEGAINQ9BUH8 593 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 WDR18Q9BV38 432 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMG6-216ENST00000575176 CRNKL1Q9BZJ0 848 aaKnown RBP10.48□□□□□ -0.73
SMG6-216ENST00000575176 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMG6-216ENST00000575176 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 IL25Q9H293 177 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
SMG6-216ENST00000575176 TACC3Q9Y6A5 838 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 ZHX2Q9Y6X8 837 aa10.48□□□□□ -0.73
SMG6-216ENST00000575176 LCTP09848 1927 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 USP5P45974 858 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 CTR9Q6PD62 1173 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 C17orf99Q6UX52 265 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 SIAH1Q8IUQ4 282 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 FOXP4Q8IVH2 680 aaPredicted RBP10.47□□□□□ -0.73
SMG6-216ENST00000575176 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 DYNLL2Q96FJ2 89 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 ARHGAP39Q9C0H5 1083 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 RWDD1Q9H446 243 aaPredicted RBP10.47□□□□□ -0.73
SMG6-216ENST00000575176 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 PLIN4Q96Q06 1357 aa10.47□□□□□ -0.73
SMG6-216ENST00000575176 TRIM75PA6NK02 468 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 PDHXO00330 501 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 ERC2O15083 957 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 TLR2O60603 784 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 GH2P01242 217 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 ZFYP08048 801 aaPredicted RBP10.46□□□□□ -0.73
SMG6-216ENST00000575176 TAF1CQ15572 869 aaPredicted RBP10.46□□□□□ -0.73
SMG6-216ENST00000575176 SBK1Q52WX2 424 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 VPS53Q5VIR6 699 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 B4GALNT3Q6L9W6 998 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 CCDC129Q6ZRS4 1044 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 C16orf86Q6ZW13 317 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 ZNF589Q86UQ0 364 aaPredicted RBP10.46□□□□□ -0.73
SMG6-216ENST00000575176 CLEC10AQ8IUN9 316 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 PROCA1Q8NCQ7 364 aaPredicted RBP10.46□□□□□ -0.73
SMG6-216ENST00000575176 ZNF280CQ8ND82 737 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 AGTPBP1Q9UPW5 1226 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 SLC45A1Q9Y2W3 748 aa10.46□□□□□ -0.73
SMG6-216ENST00000575176 A0A1W2PRG0 241 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 USP17L21D6R901 530 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 HLA-DOAP06340 250 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 ASNSP08243 561 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 CYP2C8P10632 490 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 AKR1B1P15121 316 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 HMGCS2P54868 508 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 SPP2Q13103 211 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 MTMR2Q13614 643 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 KIAA1755Q5JYT7 1200 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 ZSCAN25Q6NSZ9 544 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 OTOP1Q7RTM1 612 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 CTU1Q7Z7A3 348 aaKnown RBP10.45□□□□□ -0.74
SMG6-216ENST00000575176 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 ACER1Q8TDN7 264 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 ABHD8Q96I13 439 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 C12orf42Q96LP6 360 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 PICK1Q9NRD5 415 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 SLC4A4Q9Y6R1 1079 aa10.45□□□□□ -0.74
SMG6-216ENST00000575176 LRRC37A2A6NM11 1700 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 ZMYM6O95789 1325 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 IGKV6D-41A0A0C4DH26 115 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 FKTNO75072 461 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 RASA1P20936 1047 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 BACE1P56817 501 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 TTC6Q86TZ1 520 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 SKAP1Q86WV1 359 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 CD99L2Q8TCZ2 262 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 EMILIN3Q9NT22 766 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 ARPP21Q9UBL0 812 aaPredicted RBP10.44□□□□□ -0.74
SMG6-216ENST00000575176 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMG6-216ENST00000575176 PLXNA1Q9UIW2 1896 aa10.44□□□□□ -0.74
SMG6-216ENST00000575176 CDK8P49336 464 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms