RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 COL9A3Q14050 684 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-212ENST00000575116 TOB2Q14106 344 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-212ENST00000575116 SUPT20HL1Q3ZLR7 823 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 NEDD1Q8NHV4 660 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
PRPF8-212ENST00000575116 UBAC1Q9BSL1 405 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 LIMCH1Q9UPQ0 1083 aa14.01□□□□□ -0.17
PRPF8-212ENST00000575116 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
PRPF8-212ENST00000575116 IFIT3O14879 490 aaKnown RBP14□□□□□ -0.17
PRPF8-212ENST00000575116 CD2BP2O95400 341 aaKnown RBP14□□□□□ -0.17
PRPF8-212ENST00000575116 TSPY3P0CV98 308 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 TSPY8P0CW00 308 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 CERKLQ49MI3 558 aaPredicted RBP14□□□□□ -0.17
PRPF8-212ENST00000575116 FAM47AQ5JRC9 791 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 DCAF15Q66K64 600 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 CHST3Q7LGC8 479 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 DGKHQ86XP1 1220 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 NKX2-3Q8TAU0 364 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 ANKS1AQ92625 1134 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 TBC1D2Q9BYX2 928 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 DNAJC18Q9H819 358 aa14□□□□□ -0.17
PRPF8-212ENST00000575116 ANGEL1Q9UNK9 670 aaKnown RBP14□□□□□ -0.17
PRPF8-212ENST00000575116 PLIN4Q96Q06 1357 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 SH2B2O14492 632 aaPredicted RBP13.99□□□□□ -0.17
PRPF8-212ENST00000575116 SEC23AQ15436 765 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 EAPPQ56P03 285 aaPredicted RBP13.99□□□□□ -0.17
PRPF8-212ENST00000575116 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 CDC37L1Q7L3B6 337 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 BRF1Q92994 677 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 ZNF274Q96GC6 653 aaPredicted RBP13.99□□□□□ -0.17
PRPF8-212ENST00000575116 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 SH2B1Q9NRF2 756 aaPredicted RBP13.99□□□□□ -0.17
PRPF8-212ENST00000575116 GINM1Q9NU53 330 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 SRCAPQ6ZRS2 3230 aa13.99□□□□□ -0.17
PRPF8-212ENST00000575116 POLR2AP24928 1970 aaKnown RBP13.98□□□□□ -0.17
PRPF8-212ENST00000575116 MYH8P13535 1937 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 TNKSO95271 1327 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 NOVP48745 357 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 WTAPQ15007 396 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 NBPF12Q5TAG4 269 aaPredicted RBP13.98□□□□□ -0.17
PRPF8-212ENST00000575116 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 IPO9Q96P70 1041 aaKnown RBP13.98□□□□□ -0.17
PRPF8-212ENST00000575116 LRRC2Q9BYS8 371 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 CABP5Q9NP86 173 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 IL17RBQ9NRM6 502 aa13.98□□□□□ -0.17
PRPF8-212ENST00000575116 IGKV6D-41A0A0C4DH26 115 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 AKR1B1P15121 316 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 RCAN1P53805 252 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 ABCB5Q2M3G0 1257 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
PRPF8-212ENST00000575116 TMEM179Q6ZVK1 233 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 MIGA2Q7L4E1 593 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 CDAN1Q8IWY9 1227 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
PRPF8-212ENST00000575116 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 ZKSCAN3Q9BRR0 538 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 ZNF341Q9BYN7 854 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 ZNF112Q9UJU3 913 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 SCAF8Q9UPN6 1271 aaKnown RBP13.97□□□□□ -0.17
PRPF8-212ENST00000575116 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
PRPF8-212ENST00000575116 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 PHF20L1A8MW92 1017 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 CTNND1O60716 968 aaKnown RBP13.96□□□□□ -0.17
PRPF8-212ENST00000575116 CAP2P40123 477 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 RCSD1Q6JBY9 416 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 SYNE3Q6ZMZ3 975 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 LDHDQ86WU2 507 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRPF8-212ENST00000575116 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 MTMR4Q9NYA4 1195 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.17
PRPF8-212ENST00000575116 TPCN1Q9ULQ1 816 aa13.96□□□□□ -0.17
PRPF8-212ENST00000575116 MPHOSPH10O00566 681 aaKnown RBP13.95□□□□□ -0.18
PRPF8-212ENST00000575116 CALM1P0DP23 149 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 CALM2P0DP24 149 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 CALM3P0DP25 149 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 PDIA3P30101 505 aaKnown RBP13.95□□□□□ -0.18
PRPF8-212ENST00000575116 NF2P35240 595 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 CUL4AQ13619 759 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 PPP2R5BQ15173 497 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 NFXL1Q6ZNB6 911 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 NMRK2Q9NPI5 230 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 GPHNQ9NQX3 736 aaPredicted RBP13.95□□□□□ -0.18
PRPF8-212ENST00000575116 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 BRPF3Q9ULD4 1205 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
PRPF8-212ENST00000575116 GREB1LQ9C091 1923 aaPredicted RBP13.95□□□□□ -0.18
PRPF8-212ENST00000575116 KLF18A0A0U1RQI7 1052 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms