RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 ZNF804BA4D1E1 1349 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 ELF2Q15723 593 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
RPAIN-212ENST00000573126 NFE2L3Q9Y4A8 694 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 BCL9LQ86UU0 1499 aa12.86□□□□□ -0.35
RPAIN-212ENST00000573126 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
RPAIN-212ENST00000573126 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 CHD4Q14839 1912 aa12.85□□□□□ -0.35
RPAIN-212ENST00000573126 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
RPAIN-212ENST00000573126 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
RPAIN-212ENST00000573126 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 PKN1Q16512 942 aa12.85□□□□□ -0.35
RPAIN-212ENST00000573126 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 SMARCE1Q969G3 411 aa12.85□□□□□ -0.35
RPAIN-212ENST00000573126 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 V9GY48 417 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-212ENST00000573126 WNT7AO00755 349 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 KLRK1P26718 216 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 CAVIN4Q5BKX8 364 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 EPSTI1Q96J88 318 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 MTA3Q9BTC8 594 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 CGNQ9P2M7 1197 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 SLU7O95391 586 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 LRRN4CLQ8ND94 238 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
RPAIN-212ENST00000573126 DHX58Q96C10 678 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 ERO1AQ96HE7 468 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 CEP131Q9UPN4 1083 aa12.84□□□□□ -0.35
RPAIN-212ENST00000573126 A0A087X0B3 334 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 TRIM75PA6NK02 468 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 NMT2O60551 498 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.35
RPAIN-212ENST00000573126 CASP1P29466 404 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 KCNJ6P48051 423 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 RCAN1P53805 252 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 KMT5BQ4FZB7 885 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 FAM84BQ96KN1 310 aaPredicted RBP12.83□□□□□ -0.35
RPAIN-212ENST00000573126 MED15Q96RN5 788 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 DNAI1Q9UI46 699 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 MINPP1Q9UNW1 487 aa12.83□□□□□ -0.35
RPAIN-212ENST00000573126 COL16A1Q07092 1604 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-212ENST00000573126 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 USP17L21D6R901 530 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 XBP1P17861 261 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 AFMP43652 599 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 SARSP49591 514 aaKnown RBP12.83□□□□□ -0.36
RPAIN-212ENST00000573126 FUT2Q10981 343 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 UBE4AQ14139 1066 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 MORC3Q14149 939 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 NT5DC1Q5TFE4 455 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
RPAIN-212ENST00000573126 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
RPAIN-212ENST00000573126 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-212ENST00000573126 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.36
RPAIN-212ENST00000573126 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-212ENST00000573126 TROAPQ12815 778 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 DHX8Q14562 1220 aaKnown RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 CTR9Q6PD62 1173 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 CICQ96RK0 1608 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 NUTM2BA6NNL0 878 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 NUTM2EB1AL46 878 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 KRT2P35908 639 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 FBXO38Q6PIJ6 1188 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 NUTM2AQ8IVF1 878 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 FAM177A1Q8N128 213 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 FEZ1Q99689 392 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 TMX1Q9H3N1 280 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 AATFQ9NY61 560 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 BCORQ6W2J9 1755 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 ZNF18P17022 549 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 ADKP55263 362 aaKnown RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 ETF1P62495 437 aaKnown RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 ERCC6LQ2NKX8 1250 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 FAM47AQ5JRC9 791 aa12.82□□□□□ -0.36
RPAIN-212ENST00000573126 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-212ENST00000573126 L2HGDHQ9H9P8 463 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms