RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 ABCB5Q2M3G0 1257 aa27.62■■■□□ 2.01
TVP23A-206ENST00000572980 CLMNQ96JQ2 1002 aa27.62■■■□□ 2.01
TVP23A-206ENST00000572980 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.62■■■□□ 2.01
TVP23A-206ENST00000572980 LAMA4Q16363 1823 aa27.62■■■□□ 2.01
TVP23A-206ENST00000572980 MYH8P13535 1937 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 PRDM1O75626 825 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 GDF11O95390 407 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 RGMBQ6NW40 437 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 TBC1D10CQ8IV04 446 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 NBPF3Q9H094 633 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 TOMM22Q9NS69 142 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.61■■■□□ 2.01
TVP23A-206ENST00000572980 SNCAIPQ9Y6H5 919 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 OTOFQ9HC10 1997 aa27.61■■■□□ 2.01
TVP23A-206ENST00000572980 MPHOSPH10O00566 681 aaKnown RBP27.6■■■□□ 2.01
TVP23A-206ENST00000572980 RASA1P20936 1047 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 ZNF157P51786 506 aaPredicted RBP27.6■■■□□ 2.01
TVP23A-206ENST00000572980 CREB3L3Q68CJ9 461 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 ELP3Q9H9T3 547 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 SLC27A2O14975 620 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 ORC4O43929 436 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 DEFB115Q30KQ5 88 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 USP26Q9BXU7 913 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 INCENPQ9NQS7 918 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 ZBTB21Q9ULJ3 1066 aa27.6■■■□□ 2.01
TVP23A-206ENST00000572980 RASSF10A6NK89 507 aa27.59■■■□□ 2.01
TVP23A-206ENST00000572980 GH2P01242 217 aa27.59■■■□□ 2.01
TVP23A-206ENST00000572980 NT5C2P49902 561 aa27.59■■■□□ 2.01
TVP23A-206ENST00000572980 RRP12Q5JTH9 1297 aaKnown RBP27.59■■■□□ 2.01
TVP23A-206ENST00000572980 ERO1BQ86YB8 467 aa27.59■■■□□ 2.01
TVP23A-206ENST00000572980 CNNM2Q9H8M5 875 aa27.59■■■□□ 2.01
TVP23A-206ENST00000572980 TMEM179Q6ZVK1 233 aa27.58■■■□□ 2.01
TVP23A-206ENST00000572980 CCDC102AQ96A19 550 aa27.58■■■□□ 2.01
TVP23A-206ENST00000572980 DOCK1Q14185 1865 aa27.58■■■□□ 2.01
TVP23A-206ENST00000572980 RANBP6O60518 1105 aaKnown RBP27.57■■■□□ 2
TVP23A-206ENST00000572980 AKR1B1P15121 316 aa27.57■■■□□ 2
TVP23A-206ENST00000572980 ZKSCAN1P17029 563 aaPredicted RBP27.57■■■□□ 2
TVP23A-206ENST00000572980 PTPRAP18433 802 aa27.57■■■□□ 2
TVP23A-206ENST00000572980 TRDNQ13061 729 aa27.57■■■□□ 2
TVP23A-206ENST00000572980 PAXIP1Q6ZW49 1069 aaPredicted RBP27.57■■■□□ 2
TVP23A-206ENST00000572980 KRT23Q9C075 422 aa27.57■■■□□ 2
TVP23A-206ENST00000572980 TACC3Q9Y6A5 838 aa27.57■■■□□ 2
TVP23A-206ENST00000572980 SPDYE5A6NIY4 337 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 TSPY2A6NKD2 308 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 TSPY3P0CV98 308 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 TSPY8P0CW00 308 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 MCCP23508 829 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 HSPA4P34932 840 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 JAG1P78504 1218 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 PPATQ06203 517 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 ESR2Q92731 530 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 USP17L5A8MUK1 530 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 HTRA3P83110 453 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 TFAP4Q01664 338 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 RAB3GAP1Q15042 981 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 OPTNQ96CV9 577 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 TBC1D2Q9BYX2 928 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 ZHX2Q9Y6X8 837 aa27.56■■■□□ 2
TVP23A-206ENST00000572980 ATAD5Q96QE3 1844 aa27.55■■■□□ 2
TVP23A-206ENST00000572980 E7EWF7 191 aa27.55■■■□□ 2
TVP23A-206ENST00000572980 SEC24BO95487 1268 aa27.55■■■□□ 2
TVP23A-206ENST00000572980 SHROOM1Q2M3G4 852 aaPredicted RBP27.55■■■□□ 2
TVP23A-206ENST00000572980 OTUD5Q96G74 571 aa27.55■■■□□ 2
TVP23A-206ENST00000572980 NEDD4P46934 1319 aa27.54■■■□□ 2
TVP23A-206ENST00000572980 FAM47AQ5JRC9 791 aa27.54■■■□□ 2
TVP23A-206ENST00000572980 NEDD1Q8NHV4 660 aa27.54■■■□□ 2
TVP23A-206ENST00000572980 AS3MTQ9HBK9 375 aa27.54■■■□□ 2
TVP23A-206ENST00000572980 ZBTB48P10074 688 aaPredicted RBP27.53■■■□□ 2
TVP23A-206ENST00000572980 ECE1P42892 770 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 SEPT2Q15019 361 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 TSGA10IPQ3SY00 556 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 RALYLQ86SE5 291 aaKnown RBP27.53■■■□□ 2
TVP23A-206ENST00000572980 RASAL3Q86YV0 1011 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 NCOA7Q8NI08 942 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 WNK4Q96J92 1243 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 KANSL2Q9H9L4 492 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.53■■■□□ 2
TVP23A-206ENST00000572980 TAF6LQ9Y6J9 622 aa27.53■■■□□ 2
TVP23A-206ENST00000572980 B4E1Z4 1266 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 SLC10A3P09131 477 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 PPIL2Q13356 520 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 KRT32Q14532 448 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 SPRYD7Q5W111 196 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 CYP4F22Q6NT55 531 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 CNKSR2Q8WXI2 1034 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 GUCY1A2P33402 732 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 KCNB2Q92953 911 aa27.52■■■□□ 2
TVP23A-206ENST00000572980 KDM4AO75164 1064 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 GRM1Q13255 1194 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 STOX1Q6ZVD7 989 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 CCDC84Q86UT8 332 aaPredicted RBP27.51■■□□□ 1.99
TVP23A-206ENST00000572980 RASEFQ8IZ41 740 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 ZNF280CQ8ND82 737 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 CAPNS2Q96L46 248 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 WDR18Q9BV38 432 aa27.51■■□□□ 1.99
TVP23A-206ENST00000572980 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.51■■□□□ 1.99
TVP23A-206ENST00000572980 PLIN4Q96Q06 1357 aa27.5■■□□□ 1.99
TVP23A-206ENST00000572980 PPP4R3BQ5MIZ7 849 aa27.5■■□□□ 1.99
TVP23A-206ENST00000572980 AFG3L2Q9Y4W6 797 aa27.5■■□□□ 1.99
TVP23A-206ENST00000572980 FAM155AB1AL88 458 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms