RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PTPRAP18433 802 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 NFIAQ12857 509 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
RPAIN-209ENST00000571558 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 MGAMO43451 1857 aa16.57■□□□□ 0.24
RPAIN-209ENST00000571558 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 GOLIM4O00461 696 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
RPAIN-209ENST00000571558 DEFB123Q8N688 67 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 IDI2Q9BXS1 227 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 USP40Q9NVE5 1235 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 DENND2AQ9ULE3 1009 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
RPAIN-209ENST00000571558 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
RPAIN-209ENST00000571558 FAM110CQ1W6H9 321 aa16.55■□□□□ 0.24
RPAIN-209ENST00000571558 RILPL2Q969X0 211 aa16.55■□□□□ 0.24
RPAIN-209ENST00000571558 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
RPAIN-209ENST00000571558 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.24
RPAIN-209ENST00000571558 ATRNL1Q5VV63 1379 aa16.55■□□□□ 0.24
RPAIN-209ENST00000571558 DIXDC1Q155Q3 683 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 TICAM2Q86XR7 235 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
RPAIN-209ENST00000571558 AGTPBP1Q9UPW5 1226 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 RPTORQ8N122 1335 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 RFX7Q2KHR2 1363 aa16.54■□□□□ 0.24
RPAIN-209ENST00000571558 HMGCRP04035 888 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-209ENST00000571558 TDHQ8IZJ6 230 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 CDC45O75419 566 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 PRDX5P30044 214 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-209ENST00000571558 TBC1D9Q6ZT07 1266 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 ZGPATQ8N5A5 531 aaKnown RBP16.53■□□□□ 0.24
RPAIN-209ENST00000571558 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-209ENST00000571558 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
RPAIN-209ENST00000571558 HMX1Q9NP08 348 aaPredicted RBP16.53■□□□□ 0.24
RPAIN-209ENST00000571558 CHMLP26374 656 aa16.52■□□□□ 0.23
RPAIN-209ENST00000571558 PABPC4Q13310 644 aaKnown RBP eCLIP16.52■□□□□ 0.231e-6■■■■□ 26.3
RPAIN-209ENST00000571558 ZFPM1Q8IX07 1006 aa16.52■□□□□ 0.23
RPAIN-209ENST00000571558 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.23
RPAIN-209ENST00000571558 ANKRD13CQ8N6S4 541 aa16.52■□□□□ 0.23
RPAIN-209ENST00000571558 MTMR10Q9NXD2 777 aa16.52■□□□□ 0.23
RPAIN-209ENST00000571558 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
RPAIN-209ENST00000571558 DOCK2Q92608 1830 aa16.51■□□□□ 0.23
RPAIN-209ENST00000571558 TBC1D12O60347 775 aa16.51■□□□□ 0.23
RPAIN-209ENST00000571558 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-209ENST00000571558 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-209ENST00000571558 FSD1Q9BTV5 496 aa16.51■□□□□ 0.23
RPAIN-209ENST00000571558 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
RPAIN-209ENST00000571558 TRIM75PA6NK02 468 aa16.5■□□□□ 0.23
RPAIN-209ENST00000571558 DIS3LQ8TF46 1054 aaKnown RBP16.5■□□□□ 0.23
RPAIN-209ENST00000571558 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
RPAIN-209ENST00000571558 OGDHLQ9ULD0 1010 aa16.5■□□□□ 0.23
RPAIN-209ENST00000571558 MYH13Q9UKX3 1938 aa16.5■□□□□ 0.23
RPAIN-209ENST00000571558 GAKO14976 1311 aa16.5■□□□□ 0.23
RPAIN-209ENST00000571558 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
RPAIN-209ENST00000571558 CHGBP05060 677 aa16.49■□□□□ 0.23
RPAIN-209ENST00000571558 MAGEA10P43363 369 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-209ENST00000571558 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
RPAIN-209ENST00000571558 ZMYND8Q9ULU4 1186 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-209ENST00000571558 UNC80Q8N2C7 3258 aa16.48■□□□□ 0.23
RPAIN-209ENST00000571558 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
RPAIN-209ENST00000571558 HIP1O00291 1037 aa16.48■□□□□ 0.23
RPAIN-209ENST00000571558 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
RPAIN-209ENST00000571558 ZNF384Q8TF68 577 aa16.48■□□□□ 0.23
RPAIN-209ENST00000571558 BACH2Q9BYV9 841 aa16.48■□□□□ 0.23
RPAIN-209ENST00000571558 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
RPAIN-209ENST00000571558 RNF113AO15541 343 aaKnown RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 IGSF3O75054 1194 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 IDH1O75874 414 aaKnown RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 PDE6AP16499 860 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 ADD2P35612 726 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 FAM227BQ96M60 508 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 OSBPL5Q9H0X9 879 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 IL25Q9H293 177 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
RPAIN-209ENST00000571558 MYO5AQ9Y4I1 1855 aaKnown RBP16.47■□□□□ 0.23
RPAIN-209ENST00000571558 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-209ENST00000571558 XRCC5P13010 732 aaKnown RBP16.46■□□□□ 0.23
RPAIN-209ENST00000571558 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 NMIQ13287 307 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-209ENST00000571558 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 SLC9C2Q5TAH2 1124 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
RPAIN-209ENST00000571558 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms