RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TM4SF4P48230 202 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 PPIL2Q13356 520 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 MCMDC2Q4G0Z9 681 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
SMG6-209ENST00000571442 ERO1BQ86YB8 467 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 CLEC10AQ8IUN9 316 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 FAM43AQ8N2R8 423 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 CRACR2BQ8N4Y2 399 aaPredicted RBP8.38□□□□□ -1.07
SMG6-209ENST00000571442 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 RNF186Q9NXI6 227 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 KCNH4Q9UQ05 1017 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 AFG3L2Q9Y4W6 797 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 ZHX2Q9Y6X8 837 aa8.38□□□□□ -1.07
SMG6-209ENST00000571442 ROBO3Q96MS0 1386 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 CCDC171Q6TFL3 1326 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 GH2P01242 217 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 HSPD1P10809 573 aaKnown RBP8.37□□□□□ -1.07
SMG6-209ENST00000571442 AKR1B1P15121 316 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 CHMLP26374 656 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 CDK8P49336 464 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 CAP1Q01518 475 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 PPATQ06203 517 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 SBK1Q52WX2 424 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 GPAT2Q6NUI2 795 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 TTC6Q86TZ1 520 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 IFNL1Q8IU54 200 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 ABHD8Q96I13 439 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMG6-209ENST00000571442 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 ZBTB21Q9ULJ3 1066 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 ZSWIM8A7E2V4 1837 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 LOC285556D6RIA3 1793 aa8.37□□□□□ -1.07
SMG6-209ENST00000571442 LAMA4Q16363 1823 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 CCL15-CCL14A0A0B4J2E2 113 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 MANSC4A6NHS7 340 aaPredicted RBP8.36□□□□□ -1.07
SMG6-209ENST00000571442 TRIM75PA6NK02 468 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 BTBD19C9JJ37 291 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 CA12O43570 354 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 PRDM1O75626 825 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 TRPA1O75762 1119 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 TBC1D8O95759 1140 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 FGAP02671 866 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 APPP05067 770 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 GNAT2P19087 354 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 RASA1P20936 1047 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 TDO2P48775 406 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 CTDSPL2Q05D32 466 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 SPP2Q13103 211 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 SEPT2Q15019 361 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 CCL15Q16663 113 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
SMG6-209ENST00000571442 ERICH6BQ5W0A0 696 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 SIAH1Q8IUQ4 282 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 ACER1Q8TDN7 264 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 PICK1Q9NRD5 415 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 DIAPH3Q9NSV4 1193 aa8.36□□□□□ -1.07
SMG6-209ENST00000571442 ARPP21Q9UBL0 812 aaPredicted RBP8.36□□□□□ -1.07
SMG6-209ENST00000571442 A0A0G2JLL6 359 aaPredicted RBP8.35□□□□□ -1.07
SMG6-209ENST00000571442 A0A1W2PRG0 241 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 GTF2A2P52657 109 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 HAND2P61296 217 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 PTH1RQ03431 593 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 PPARAQ07869 468 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 ALX1Q15699 326 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 ABCB5Q2M3G0 1257 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 CERKLQ49MI3 558 aaPredicted RBP8.35□□□□□ -1.07
SMG6-209ENST00000571442 KIAA1755Q5JYT7 1200 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 TREML2Q5T2D2 321 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 PRRT2Q7Z6L0 340 aaPredicted RBP8.35□□□□□ -1.07
SMG6-209ENST00000571442 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 TRIM34Q9BYJ4 488 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 NAPBQ9H115 298 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG6-209ENST00000571442 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
SMG6-209ENST00000571442 PDE4DIPQ5VU43 2346 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 CCDC85CA6NKD9 419 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 CXCL11O14625 94 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 SGSM2O43147 1006 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 ASNSP08243 561 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 HMGCS2P54868 508 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 SREBF2Q12772 1141 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 CRHR2Q13324 411 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 SNAPC2Q13487 334 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 MTMR2Q13614 643 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 RAB3GAP1Q15042 981 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 BMP2KLQ5H9B9 411 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 POTEEQ6S8J3 1075 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 TICAM2Q86XR7 235 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 ZNF280CQ8ND82 737 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 WDR18Q9BV38 432 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 SWAP70Q9UH65 585 aa8.34□□□□□ -1.07
SMG6-209ENST00000571442 ADGRA2Q96PE1 1338 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 RLFQ13129 1914 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 IGKV6D-41A0A0C4DH26 115 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms