RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GPBP1L1Q9HC44 474 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 PGAP2Q9UHJ9 254 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 HERC5Q9UII4 1024 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 ERICH2A1L162 156 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 SH2B2O14492 632 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 IFIT3O14879 490 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TFAP4Q01664 338 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TMEM67Q5HYA8 995 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 METTL16Q86W50 562 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 IQCA1Q86XH1 822 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 ZNF526Q8TF50 670 aaPredicted RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 ZC3H15Q8WU90 426 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 BRF1Q92994 677 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 ZKSCAN3Q9BRR0 538 aa18.15■□□□□ 0.5
HERPUD1-219ENST00000570273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■□□□□ 11
HERPUD1-219ENST00000570273 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 KIF3CO14782 793 aa18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 LARP6Q9BRS8 491 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 MTA3Q9BTC8 594 aa18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 RRAGCQ9HB90 399 aa18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 NMRK2Q9NPI5 230 aa18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 GPHNQ9NQX3 736 aaPredicted RBP18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 ANGEL1Q9UNK9 670 aaKnown RBP18.14■□□□□ 0.49
HERPUD1-219ENST00000570273 TNKSO95271 1327 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 ADM5C9JUS6 153 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 AKR1B1P15121 316 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 VEGFAP15692 232 aaPredicted RBP18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 NBPF12Q5TAG4 269 aaPredicted RBP18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 KRT26Q7Z3Y9 468 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 AGXT2Q9BYV1 514 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 CLEC11AQ9Y240 323 aa18.13■□□□□ 0.49
HERPUD1-219ENST00000570273 PLIN4Q96Q06 1357 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 TBC1D12O60347 775 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 APOBRQ0VD83 1088 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 WTAPQ15007 396 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 CERKLQ49MI3 558 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 TATDN1Q6P1N9 297 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 MIGA2Q7L4E1 593 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 NEDD1Q8NHV4 660 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 LY9Q9HBG7 655 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 NAP1L2Q9ULW6 460 aaPredicted RBP18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 LIMCH1Q9UPQ0 1083 aa18.12■□□□□ 0.49
HERPUD1-219ENST00000570273 NMT2O60551 498 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 GDF11O95390 407 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 PRAMEF18Q5VWM3 479 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 NFXL1Q6ZNB6 911 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 IGDCC4Q8TDY8 1250 aa18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
HERPUD1-219ENST00000570273 KLF18A0A0U1RQI7 1052 aa18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 IFIT1BQ5T764 474 aaKnown RBP18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 ENAHQ8N8S7 591 aaPredicted RBP18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 TMX3Q96JJ7 454 aa18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 TCP11L1Q9NUJ3 509 aa18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 MYH8P13535 1937 aa18.1■□□□□ 0.49
HERPUD1-219ENST00000570273 CCDC69A6NI79 296 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 LARGE1O95461 756 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 POTEJP0CG39 1038 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 LIFRP42702 1097 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 SEC23AQ15436 765 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 ABCB5Q2M3G0 1257 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 SENP2Q9HC62 589 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 SSC5DA1L4H1 1573 aa18.09■□□□□ 0.49
HERPUD1-219ENST00000570273 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 MAP3K10Q02779 954 aa18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 SGMS1Q86VZ5 419 aa18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 ZNF341Q9BYN7 854 aa18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 CABP5Q9NP86 173 aa18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 IL17RBQ9NRM6 502 aa18.08■□□□□ 0.49
HERPUD1-219ENST00000570273 GH2P01242 217 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 SLC4A3P48751 1232 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 STK3Q13188 491 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 RRP1BQ14684 758 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 SHROOM1Q2M3G4 852 aaPredicted RBP18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 TMEM179Q6ZVK1 233 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 LDHDQ86WU2 507 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 TMTC2Q8N394 836 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 CDCA5Q96FF9 252 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 CEP95Q96GE4 821 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 STX8Q9UNK0 236 aa18.07■□□□□ 0.48
HERPUD1-219ENST00000570273 IGKV6D-41A0A0C4DH26 115 aa18.06■□□□□ 0.48
HERPUD1-219ENST00000570273 ME3Q16798 604 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms