RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 SDSP20132 328 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 CDK8P49336 464 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 GTF2A2P52657 109 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 SEPT2Q15019 361 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 GADL1Q6ZQY3 521 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 EVI5LQ96CN4 794 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 ZBTB21Q9ULJ3 1066 aa11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 COL2A1P02458 1487 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-212ENST00000570129 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 A0A1W2PRG0 241 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 GPR25O00155 361 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 PRDM1O75626 825 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 APPP05067 770 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 CTGFP29279 349 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 HMGCS2P54868 508 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 SREBF2Q12772 1141 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 ZSCAN25Q6NSZ9 544 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 ARHGAP39Q9C0H5 1083 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-212ENST00000570129 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 USP17L5A8MUK1 530 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 PATL2C9JE40 543 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 PDHXO00330 501 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 IGSF3O75054 1194 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 CETPP11597 493 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 CERKLQ49MI3 558 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 TTC22Q5TAA0 569 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 CHMP4CQ96CF2 233 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 EHD4Q9H223 541 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 PRDM10Q9NQV6 1147 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 CPA4Q9UI42 421 aa11.78□□□□□ -0.52
GTF3C1-212ENST00000570129 MPHOSPH10O00566 681 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 CXCL11O14625 94 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 CA12O43570 354 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 MTMR2Q13614 643 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 TAF1CQ15572 869 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 CWC27Q6UX04 472 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 ZNF280CQ8ND82 737 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 CD99L2Q8TCZ2 262 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 TRIM34Q9BYJ4 488 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 SAGE1Q9NXZ1 904 aa11.77□□□□□ -0.53
GTF3C1-212ENST00000570129 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 CAPN15O75808 1086 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 RASA1P20936 1047 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 INHBEP58166 350 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 HAND2P61296 217 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 FAM47AQ5JRC9 791 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 C16orf86Q6ZW13 317 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 TNS4Q8IZW8 715 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 WDR18Q9BV38 432 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 TAF6LQ9Y6J9 622 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 MYH1P12882 1939 aa11.76□□□□□ -0.53
GTF3C1-212ENST00000570129 DDX60LQ5H9U9 1706 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 FGAP02671 866 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 TDO2P48775 406 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 BACE1P56817 501 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 TMED8Q6PL24 325 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 ANKRD23Q86SG2 305 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 MCOLN1Q9GZU1 580 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 HELLSQ9NRZ9 838 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 ADGRA2Q96PE1 1338 aa11.75□□□□□ -0.53
GTF3C1-212ENST00000570129 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 NMT2O60551 498 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 ASNSP08243 561 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 CHMLP26374 656 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 PTH1RQ03431 593 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 COL9A3Q14050 684 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 C17orf99Q6UX52 265 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 CCDC136Q96JN2 1154 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 CFHR5Q9BXR6 569 aa11.74□□□□□ -0.53
GTF3C1-212ENST00000570129 FKTNO75072 461 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 MYH7P12883 1935 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 PPARAQ07869 468 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 CENPQQ7L2Z9 268 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms