RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 CCDC88AQ3V6T2 1871 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 FRYQ5TBA9 3013 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 MYO1BO43795 1136 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 GTF2IP78347 998 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 DHX8Q14562 1220 aaKnown RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 SASS6Q6UVJ0 657 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 FBXO18Q8NFZ0 1043 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 GLT8D2Q9H1C3 349 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 TNKSO95271 1327 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 NID2Q14112 1375 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 RILPL1Q5EBL4 403 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 FANCBQ8NB91 859 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 SLC26A6Q9BXS9 759 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 TCP11L1Q9NUJ3 509 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 ZSWIM5Q9P217 1185 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 MYH13Q9UKX3 1938 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 LARGE1O95461 756 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 ZNF827Q17R98 1081 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 LRSAM1Q6UWE0 723 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 CRACR2BQ8N4Y2 399 aaPredicted RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 SDR42E1Q8WUS8 393 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 LARP6Q9BRS8 491 aaKnown RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 GRPEL1Q9HAV7 217 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 EPB41L4AQ9HCS5 686 aaPredicted RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
CYLD-216ENST00000569891 SEC63Q9UGP8 760 aaKnown RBP6.97□□□□□ -1.29
CYLD-216ENST00000569891 USP17L3A6NCW0 530 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 USP17L4A6NCW7 530 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 FGRP09769 529 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 PRDX5P30044 214 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 ME1P48163 572 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 RBM5P52756 815 aaKnown RBP eCLIP6.96□□□□□ -1.29
CYLD-216ENST00000569891 MAP3K11Q16584 847 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 LY9Q9HBG7 655 aa6.96□□□□□ -1.29
CYLD-216ENST00000569891 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.29
CYLD-216ENST00000569891 CCDC173Q0VFZ6 552 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 MCTP2Q6DN12 878 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 CTR9Q6PD62 1173 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 IGDCC4Q8TDY8 1250 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 TNMDQ9H2S6 317 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 TIAM2Q8IVF5 1701 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 SNAP23O00161 211 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 RIMBP2O15034 1052 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 TGFB2P61812 414 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 DNM1Q05193 864 aaKnown RBP6.96□□□□□ -1.3
CYLD-216ENST00000569891 C12orf60Q5U649 245 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 HOOK2Q96ED9 719 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 CAMKK2Q96RR4 588 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 CNPY2Q9Y2B0 182 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 NEDD4P46934 1319 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 DMXL1Q9Y485 3027 aa6.96□□□□□ -1.3
CYLD-216ENST00000569891 GAKO14976 1311 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 TPM3P06753 285 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 SMARCA1P28370 1054 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 ZSCAN23Q3MJ62 389 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 KANK3Q6NY19 840 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 CDC37L1Q7L3B6 337 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 CHST3Q7LGC8 479 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 FERMT3Q86UX7 667 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 TGFBRAP1Q8WUH2 860 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 JDP2Q8WYK2 163 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 FOXP1Q9H334 677 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 ZDHHC9Q9Y397 364 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 LAMA4Q16363 1823 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 ROBO3Q96MS0 1386 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 PRPF3O43395 683 aaKnown RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 PRKAB2O43741 272 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 TXLNAP40222 546 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 TNNI2P48788 182 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 DYNLL1P63167 89 aaKnown RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 PROM2Q8N271 834 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 NAP1L4Q99733 375 aaKnown RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 CABP5Q9NP86 173 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 SH3GLB2Q9NR46 395 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 POLR3EQ9NVU0 708 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 WDR87Q6ZQQ6 2873 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 PPIP5K2O43314 1243 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 NRDCO43847 1150 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 TOP1P11387 765 aaKnown RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 RESTQ13127 1097 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 NIM1KQ8IY84 436 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 PARP14Q460N5 1801 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 A0A1W2PQ27 194 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 A0A1W2PQ64 194 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 A0A1W2PQD8 194 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 JAK2O60674 1132 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 KRT2P35908 639 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 ANTXR2P58335 489 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 FOXD4L6Q3SYB3 417 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 FOXD4L3Q6VB84 417 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 TEX2Q8IWB9 1127 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 LEO1Q8WVC0 666 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 RTFDC1Q9BY42 306 aaPredicted RBP6.95□□□□□ -1.3
CYLD-216ENST00000569891 RTEL1Q9NZ71 1219 aa6.95□□□□□ -1.3
CYLD-216ENST00000569891 TRAPPC10P48553 1259 aa6.94□□□□□ -1.3
CYLD-216ENST00000569891 TFAP4Q01664 338 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms