RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 ZNF280CQ8ND82 737 aa18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 ZNF384Q8TF68 577 aa18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 NSUN4Q96CB9 384 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 PRO3102Q9H379 93 aa18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 HMG20BQ9P0W2 317 aa18.81■□□□□ 0.6
SCAMP2-210ENST00000569124 A0A1W2PPC1 479 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 HMGCRP04035 888 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 HMGCS2P54868 508 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 PI16Q6UXB8 463 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 TEX11Q8IYF3 940 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 NOL10Q9BSC4 688 aaKnown RBP18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 AS3MTQ9HBK9 375 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
SCAMP2-210ENST00000569124 ARID4AP29374 1257 aaPredicted RBP18.79■□□□□ 0.6
SCAMP2-210ENST00000569124 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
SCAMP2-210ENST00000569124 CRISPLD2Q9H0B8 497 aa18.79■□□□□ 0.6
SCAMP2-210ENST00000569124 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
SCAMP2-210ENST00000569124 GPR108Q9NPR9 543 aa18.79■□□□□ 0.6
SCAMP2-210ENST00000569124 HERC5Q9UII4 1024 aaKnown RBP18.79■□□□□ 0.6
SCAMP2-210ENST00000569124 USP17L5A8MUK1 530 aa18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 SMARCA5O60264 1052 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 CAP2P40123 477 aa18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 NUCB1Q02818 461 aa18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 TBC1D9Q6ZT07 1266 aa18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 NECAB2Q7Z6G3 386 aa18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 PAWRQ96IZ0 340 aaKnown RBP18.78■□□□□ 0.6
SCAMP2-210ENST00000569124 IFIT2P09913 472 aaKnown RBP18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 AACSQ86V21 672 aa18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 ANKLE1Q8NAG6 615 aa18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 LNPKQ9C0E8 428 aa18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 ASCC2Q9H1I8 757 aaPredicted RBP18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
SCAMP2-210ENST00000569124 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
SCAMP2-210ENST00000569124 MCAMP43121 646 aa18.76■□□□□ 0.59
SCAMP2-210ENST00000569124 IRX3P78415 501 aaPredicted RBP18.76■□□□□ 0.59
SCAMP2-210ENST00000569124 SH3D19Q5HYK7 790 aa18.76■□□□□ 0.59
SCAMP2-210ENST00000569124 DIS3LQ8TF46 1054 aaKnown RBP18.76■□□□□ 0.59
SCAMP2-210ENST00000569124 HMX1Q9NP08 348 aaPredicted RBP18.76■□□□□ 0.59
SCAMP2-210ENST00000569124 RPTORQ8N122 1335 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 MTMR2Q13614 643 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 SH3RF3Q8TEJ3 882 aaPredicted RBP18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 TRIM34Q9BYJ4 488 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 LAMA3Q16787 3333 aa18.75■□□□□ 0.59
SCAMP2-210ENST00000569124 BAG3O95817 575 aa18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 ASNSP08243 561 aa18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 PLCG2P16885 1265 aa18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 NAA16Q6N069 864 aaPredicted RBP18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 C7orf61Q8IZ16 206 aa18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 AATFQ9NY61 560 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
SCAMP2-210ENST00000569124 RRP1BQ14684 758 aaKnown RBP18.73■□□□□ 0.59
SCAMP2-210ENST00000569124 TTC39AQ5SRH9 613 aa18.73■□□□□ 0.59
SCAMP2-210ENST00000569124 EAF2Q96CJ1 260 aaPredicted RBP18.73■□□□□ 0.59
SCAMP2-210ENST00000569124 WDR18Q9BV38 432 aa18.73■□□□□ 0.59
SCAMP2-210ENST00000569124 STAP2Q9UGK3 403 aa18.73■□□□□ 0.59
SCAMP2-210ENST00000569124 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 TRIB2Q92519 343 aa18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 NBPF3Q9H094 633 aa18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 CCDC8Q9H0W5 538 aaPredicted RBP18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 GJD2Q9UKL4 321 aa18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 FLT1P17948 1338 aa18.72■□□□□ 0.59
SCAMP2-210ENST00000569124 SOX1O00570 391 aaPredicted RBP18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 BACE1P56817 501 aa18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 TRIM32Q13049 653 aa18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 CCDC158Q5M9N0 1113 aa18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 C11orf49Q9H6J7 331 aa18.71■□□□□ 0.59
SCAMP2-210ENST00000569124 MYH7P12883 1935 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 C19orf81C9J6K1 198 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 CYP2B6P20813 491 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 HERVK_113P62684 666 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 LRCH3Q96II8 777 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 NUDT12Q9BQG2 462 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 SNRKQ9NRH2 765 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 ZMYND8Q9ULU4 1186 aaPredicted RBP18.7■□□□□ 0.58
SCAMP2-210ENST00000569124 USP17L10C9JJH3 530 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 GDF11O95390 407 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 PRKAR2AP13861 404 aaKnown RBP18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 MX1P20591 662 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 HOXA7P31268 230 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 GPRC5AQ8NFJ5 357 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 GTF3C2Q8WUA4 911 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 DBNDD2Q9BQY9 259 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
SCAMP2-210ENST00000569124 DBNLQ9UJU6 430 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms