RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, human

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAPC5-208	ENST00000568875	CRHR2	Q13324	411 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	RRP1B	Q14684	758 aa	Known RBP	13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	MCOLN1	Q9GZU1	580 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	GRPEL1	Q9HAV7	217 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ZHX2	Q9Y6X8	837 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ZNF532	Q9HCE3	1301 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	BTBD19	C9JJ37	291 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	FKTN	O75072	461 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CHML	P26374	656 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	DGKZ	Q13574	1117 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	MOGS	Q13724	837 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ABHD8	Q96I13	439 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PICK1	Q9NRD5	415 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	AFG3L2	Q9Y4W6	797 aa		13.76	□□□□□ -0.21
SNAPC5-208	ENST00000568875	FOCAD	Q5VW36	1801 aa		13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	MAGEB6P1	A0A0J9YX57	407 aa		13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ADD2	P35612	726 aa		13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CAP2	P40123	477 aa		13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	SLFNL1	Q499Z3	407 aa		13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ZCCHC17	Q9NP64	241 aa	Known RBP	13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	RTN4	Q9NQC3	1192 aa	Known RBP	13.75	□□□□□ -0.21
SNAPC5-208	ENST00000568875	USP5	P45974	858 aa		13.74	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CTU1	Q7Z7A3	348 aa	Known RBP	13.74	□□□□□ -0.21
SNAPC5-208	ENST00000568875	INTS4	Q96HW7	963 aa	Known RBP	13.74	□□□□□ -0.21
SNAPC5-208	ENST00000568875	DNAJC18	Q9H819	358 aa		13.74	□□□□□ -0.21
SNAPC5-208	ENST00000568875	SAP30BP	Q9UHR5	308 aa	Known RBP	13.74	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CENPF	P49454	3210 aa		13.74	□□□□□ -0.21
SNAPC5-208	ENST00000568875	HTT	P42858	3142 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CHGB	P05060	677 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CUL4A	Q13619	759 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	UBE3C	Q15386	1083 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	TAF1C	Q15572	869 aa	Predicted RBP	13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	TSHZ3	Q63HK5	1081 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ANKRD23	Q86SG2	305 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	GPATCH3	Q96I76	525 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ZFYVE28	Q9HCC9	887 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	SIPA1L1	O43166	1804 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875		A0A0G2JLL6	359 aa	Predicted RBP	13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	GPAT2	Q6NUI2	795 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	FOXD4L1	Q9NU39	408 aa		13.73	□□□□□ -0.21
SNAPC5-208	ENST00000568875	TTC41P	Q6P2S7	1318 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	TLR2	O60603	784 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CAPN15	O75808	1086 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	HLA-DOA	P06340	250 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	JAG1	P78504	1218 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CCDC84	Q86UT8	332 aa	Predicted RBP	13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	LCORL	Q8N3X6	602 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	KBTBD3	Q8NAB2	608 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	MYH1	P12882	1939 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PHIP	Q8WWQ0	1821 aa		13.72	□□□□□ -0.21
SNAPC5-208	ENST00000568875	DOCK1	Q14185	1865 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PDHX	O00330	501 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PLCD1	P51178	756 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	SP3	Q02447	781 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PKN2	Q16513	984 aa	Known RBP	13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	SLC4A8	Q2Y0W8	1093 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ZSCAN25	Q6NSZ9	544 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	FASTKD5	Q7L8L6	764 aa	Known RBP	13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	TTC6	Q86TZ1	520 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	PI4K2B	Q8TCG2	481 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	EHD4	Q9H223	541 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	ARMT1	Q9H993	441 aa		13.71	□□□□□ -0.21
SNAPC5-208	ENST00000568875	USP17L5	A8MUK1	530 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	TRIM6-TRIM34	B2RNG4	842 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	NEK4	P51957	841 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	ZNF445	P59923	1031 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	TATDN1	Q6P1N9	297 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	ZNF280C	Q8ND82	737 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	SDR42E1	Q8WUS8	393 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	PUS7L	Q9H0K6	701 aa	Known RBP	13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	SERPINB13	Q9UIV8	391 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	DDX49	Q9Y6V7	483 aa	Known RBP	13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	TRIM75P	A6NK02	468 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	PRKAB2	O43741	272 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	GLRX3	O76003	335 aa	Known RBP	13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	MBD4	O95243	580 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	ASNS	P08243	561 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	CAP1	Q01518	475 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	SPP2	Q13103	211 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	TMX3	Q96JJ7	454 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	TRIM34	Q9BYJ4	488 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	GINM1	Q9NU53	330 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	LMBRD1	Q9NUN5	540 aa		13.7	□□□□□ -0.22
SNAPC5-208	ENST00000568875	GABPA	Q06546	454 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	C17orf99	Q6UX52	265 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	CD99L2	Q8TCZ2	262 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	RILPL2	Q969X0	211 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	ERO1A	Q96HE7	468 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	WDR18	Q9BV38	432 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	ATP8A2	Q9NTI2	1148 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	MCM9	Q9NXL9	1143 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	PTPRF	P10586	1907 aa		13.69	□□□□□ -0.22
SNAPC5-208	ENST00000568875	MYH7	P12883	1935 aa		13.69	□□□□□ -0.22

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