RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 SHROOM1Q2M3G4 852 aaPredicted RBP35.49■■■■□ 3.27
RAB40C-211ENST00000568586 TREML2Q5T2D2 321 aa35.49■■■■□ 3.27
RAB40C-211ENST00000568586 ARMC5Q96C12 935 aa35.49■■■■□ 3.27
RAB40C-211ENST00000568586 ARMT1Q9H993 441 aa35.49■■■■□ 3.27
RAB40C-211ENST00000568586 GDF11O95390 407 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 CTGFP29279 349 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 HMGCS2P54868 508 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 KBTBD3Q8NAB2 608 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 SDR42E1Q8WUS8 393 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 ATP8A2Q9NTI2 1148 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 TTC41PQ6P2S7 1318 aa35.48■■■■□ 3.27
RAB40C-211ENST00000568586 MBD4O95243 580 aa35.47■■■■□ 3.27
RAB40C-211ENST00000568586 CHGBP05060 677 aa35.47■■■■□ 3.27
RAB40C-211ENST00000568586 PRMT2P55345 433 aa35.47■■■■□ 3.27
RAB40C-211ENST00000568586 MCM9Q9NXL9 1143 aa35.47■■■■□ 3.27
RAB40C-211ENST00000568586 C19orf81C9J6K1 198 aa35.46■■■■□ 3.27
RAB40C-211ENST00000568586 POLR3DP05423 398 aaPredicted RBP35.46■■■■□ 3.27
RAB40C-211ENST00000568586 SHMT1P34896 483 aa35.46■■■■□ 3.27
RAB40C-211ENST00000568586 SOX10P56693 466 aa35.46■■■■□ 3.27
RAB40C-211ENST00000568586 MYH7P12883 1935 aa35.45■■■■□ 3.27
RAB40C-211ENST00000568586 MLLT1Q03111 559 aaPredicted RBP35.45■■■■□ 3.27
RAB40C-211ENST00000568586 TSHZ3Q63HK5 1081 aa35.45■■■■□ 3.27
RAB40C-211ENST00000568586 TRIM47Q96LD4 638 aa35.45■■■■□ 3.27
RAB40C-211ENST00000568586 PNMA3Q9UL41 463 aa35.45■■■■□ 3.27
RAB40C-211ENST00000568586 NAV1Q8NEY1 1877 aa35.44■■■■□ 3.26
RAB40C-211ENST00000568586 PRKAB2O43741 272 aa35.44■■■■□ 3.26
RAB40C-211ENST00000568586 GH2P01242 217 aa35.44■■■■□ 3.26
RAB40C-211ENST00000568586 PSMC4P43686 418 aa35.44■■■■□ 3.26
RAB40C-211ENST00000568586 PABPC4Q13310 644 aaKnown RBP eCLIP35.44■■■■□ 3.26
RAB40C-211ENST00000568586 MTMR2Q13614 643 aa35.44■■■■□ 3.26
RAB40C-211ENST00000568586 GCC1Q96CN9 775 aa35.44■■■■□ 3.26
RAB40C-211ENST00000568586 SALL3Q9BXA9 1300 aa35.43■■■■□ 3.26
RAB40C-211ENST00000568586 USP17L10C9JJH3 530 aa35.43■■■■□ 3.26
RAB40C-211ENST00000568586 CERKLQ49MI3 558 aaPredicted RBP35.43■■■■□ 3.26
RAB40C-211ENST00000568586 PI4K2BQ8TCG2 481 aa35.43■■■■□ 3.26
RAB40C-211ENST00000568586 PUS7LQ9H0K6 701 aaKnown RBP35.43■■■■□ 3.26
RAB40C-211ENST00000568586 PTCH2Q9Y6C5 1203 aa35.43■■■■□ 3.26
RAB40C-211ENST00000568586 ZSWIM8A7E2V4 1837 aa35.42■■■■□ 3.26
RAB40C-211ENST00000568586 HOXA7P31268 230 aaPredicted RBP35.42■■■■□ 3.26
RAB40C-211ENST00000568586 ERC2O15083 957 aa35.41■■■■□ 3.26
RAB40C-211ENST00000568586 EVX2Q03828 476 aa35.41■■■■□ 3.26
RAB40C-211ENST00000568586 OTUD7AQ8TE49 926 aaPredicted RBP35.41■■■■□ 3.26
RAB40C-211ENST00000568586 SMCR8Q8TEV9 937 aaPredicted RBP35.41■■■■□ 3.26
RAB40C-211ENST00000568586 SRRDQ9UH36 339 aa35.41■■■■□ 3.26
RAB40C-211ENST00000568586 GLRX3O76003 335 aaKnown RBP35.4■■■■□ 3.26
RAB40C-211ENST00000568586 ABCB5Q2M3G0 1257 aa35.4■■■■□ 3.26
RAB40C-211ENST00000568586 ZFYP08048 801 aaPredicted RBP35.39■■■■□ 3.26
RAB40C-211ENST00000568586 HOXD10P28358 340 aa35.39■■■■□ 3.26
RAB40C-211ENST00000568586 GCLCP48506 637 aaPredicted RBP35.39■■■■□ 3.26
RAB40C-211ENST00000568586 ASCC2Q9H1I8 757 aaPredicted RBP35.39■■■■□ 3.26
RAB40C-211ENST00000568586 TMOD4Q9NZQ9 345 aa35.39■■■■□ 3.26
RAB40C-211ENST00000568586 RNF113AO15541 343 aaKnown RBP35.38■■■■□ 3.25
RAB40C-211ENST00000568586 CYP2D6P10635 497 aa35.38■■■■□ 3.25
RAB40C-211ENST00000568586 OSBPP22059 807 aa35.38■■■■□ 3.25
RAB40C-211ENST00000568586 ZNF333Q96JL9 665 aa35.38■■■■□ 3.25
RAB40C-211ENST00000568586 STRBPQ96SI9 672 aaKnown RBP35.38■■■■□ 3.25
RAB40C-211ENST00000568586 EMILIN3Q9NT22 766 aa35.38■■■■□ 3.25
RAB40C-211ENST00000568586 SWAP70Q9UH65 585 aa35.38■■■■□ 3.25
RAB40C-211ENST00000568586 TNRC18O15417 2968 aaPredicted RBP35.37■■■■□ 3.25
RAB40C-211ENST00000568586 FMNL1O95466 1100 aaPredicted RBP35.37■■■■□ 3.25
RAB40C-211ENST00000568586 MX1P20591 662 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 GUCY1A2P33402 732 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 FCGRTP55899 365 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 FAM110CQ1W6H9 321 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 C12orf60Q5U649 245 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 APPBP2Q92624 585 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 C12orf42Q96LP6 360 aa35.37■■■■□ 3.25
RAB40C-211ENST00000568586 ANKRD45Q5TZF3 282 aa35.36■■■■□ 3.25
RAB40C-211ENST00000568586 NBPF11Q86T75 865 aa35.36■■■■□ 3.25
RAB40C-211ENST00000568586 OSBP2Q969R2 916 aa35.36■■■■□ 3.25
RAB40C-211ENST00000568586 CABP5Q9NP86 173 aa35.36■■■■□ 3.25
RAB40C-211ENST00000568586 SLC4A4Q9Y6R1 1079 aa35.36■■■■□ 3.25
RAB40C-211ENST00000568586 SLC9C1Q4G0N8 1177 aa35.35■■■■□ 3.25
RAB40C-211ENST00000568586 USP17L2Q6R6M4 530 aa35.35■■■■□ 3.25
RAB40C-211ENST00000568586 KIAA1683Q9H0B3 1180 aa35.35■■■■□ 3.25
RAB40C-211ENST00000568586 STAP2Q9UGK3 403 aa35.35■■■■□ 3.25
RAB40C-211ENST00000568586 USP17L12C9JPN9 530 aa35.34■■■■□ 3.25
RAB40C-211ENST00000568586 USP17L21D6R901 530 aa35.34■■■■□ 3.25
RAB40C-211ENST00000568586 GIMAP6Q6P9H5 292 aa35.34■■■■□ 3.25
RAB40C-211ENST00000568586 ANKRD13CQ8N6S4 541 aa35.34■■■■□ 3.25
RAB40C-211ENST00000568586 RAB3GAP1Q15042 981 aa35.33■■■■□ 3.25
RAB40C-211ENST00000568586 LRRFIP1Q32MZ4 808 aaKnown RBP35.33■■■■□ 3.25
RAB40C-211ENST00000568586 DDRGK1Q96HY6 314 aa35.33■■■■□ 3.25
RAB40C-211ENST00000568586 MORF4L1Q9UBU8 362 aa35.33■■■■□ 3.25
RAB40C-211ENST00000568586 BRCA2P51587 3418 aa35.33■■■■□ 3.25
RAB40C-211ENST00000568586 KIAA0100Q14667 2235 aaKnown RBP35.33■■■■□ 3.25
RAB40C-211ENST00000568586 DYNLL2Q96FJ2 89 aa35.32■■■■□ 3.24
RAB40C-211ENST00000568586 MYPNQ86TC9 1320 aa35.32■■■■□ 3.24
RAB40C-211ENST00000568586 USP14P54578 494 aa35.31■■■■□ 3.24
RAB40C-211ENST00000568586 CTR9Q6PD62 1173 aa35.31■■■■□ 3.24
RAB40C-211ENST00000568586 SMC5Q8IY18 1101 aa35.31■■■■□ 3.24
RAB40C-211ENST00000568586 SLC44A5Q8NCS7 719 aa35.31■■■■□ 3.24
RAB40C-211ENST00000568586 P2RX7Q99572 595 aaKnown RBP35.31■■■■□ 3.24
RAB40C-211ENST00000568586 ZBTB47Q9UFB7 747 aaPredicted RBP35.31■■■■□ 3.24
RAB40C-211ENST00000568586 MGAMO43451 1857 aa35.31■■■■□ 3.24
RAB40C-211ENST00000568586 BAZ2AQ9UIF9 1905 aaKnown RBP35.3■■■■□ 3.24
RAB40C-211ENST00000568586 GSG1L2A8MUP6 293 aa35.3■■■■□ 3.24
RAB40C-211ENST00000568586 IRX3P78415 501 aaPredicted RBP35.3■■■■□ 3.24
RAB40C-211ENST00000568586 SEPT2Q15019 361 aa35.3■■■■□ 3.24
RAB40C-211ENST00000568586 SBK1Q52WX2 424 aa35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms