RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 PUS7LQ9H0K6 701 aaKnown RBP20.63■□□□□ 0.89
KNOP1-205ENST00000568230 RWDD1Q9H446 243 aaPredicted RBP20.63■□□□□ 0.89
KNOP1-205ENST00000568230 ATP8A2Q9NTI2 1148 aa20.63■□□□□ 0.89
KNOP1-205ENST00000568230 PRKAB2O43741 272 aa20.62■□□□□ 0.89
KNOP1-205ENST00000568230 POLR3DP05423 398 aaPredicted RBP20.62■□□□□ 0.89
KNOP1-205ENST00000568230 ZFYP08048 801 aaPredicted RBP20.62■□□□□ 0.89
KNOP1-205ENST00000568230 C17orf99Q6UX52 265 aa20.62■□□□□ 0.89
KNOP1-205ENST00000568230 GADL1Q6ZQY3 521 aa20.62■□□□□ 0.89
KNOP1-205ENST00000568230 OTOP1Q7RTM1 612 aa20.62■□□□□ 0.89
KNOP1-205ENST00000568230 AS3MTQ9HBK9 375 aa20.62■□□□□ 0.89
KNOP1-205ENST00000568230 STAP2Q9UGK3 403 aa20.62■□□□□ 0.89
KNOP1-205ENST00000568230 RNF113AO15541 343 aaKnown RBP20.61■□□□□ 0.89
KNOP1-205ENST00000568230 SHMT1P34896 483 aa20.61■□□□□ 0.89
KNOP1-205ENST00000568230 CAP1Q01518 475 aa20.61■□□□□ 0.89
KNOP1-205ENST00000568230 FBXO46Q6PJ61 603 aaPredicted RBP20.61■□□□□ 0.89
KNOP1-205ENST00000568230 PROCA1Q8NCQ7 364 aaPredicted RBP20.61■□□□□ 0.89
KNOP1-205ENST00000568230 APPBP2Q92624 585 aa20.61■□□□□ 0.89
KNOP1-205ENST00000568230 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
KNOP1-205ENST00000568230 AGTPBP1Q9UPW5 1226 aa20.61■□□□□ 0.89
KNOP1-205ENST00000568230 TRIM17Q9Y577 477 aa20.61■□□□□ 0.89
KNOP1-205ENST00000568230 EVX2Q03828 476 aa20.6■□□□□ 0.89
KNOP1-205ENST00000568230 LRRFIP1Q32MZ4 808 aaKnown RBP20.6■□□□□ 0.89
KNOP1-205ENST00000568230 SH3D19Q5HYK7 790 aa20.6■□□□□ 0.89
KNOP1-205ENST00000568230 HPS5Q9UPZ3 1129 aa20.6■□□□□ 0.89
KNOP1-205ENST00000568230 BRCA2P51587 3418 aa20.6■□□□□ 0.89
KNOP1-205ENST00000568230 GH2P01242 217 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 IGHDP01880 384 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 CYP2C8P10632 490 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 CYP2D6P10635 497 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 PDE1AP54750 535 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 HMGCS2P54868 508 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 BACE1P56817 501 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 TREML2Q5T2D2 321 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 OSBP2Q969R2 916 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 STRBPQ96SI9 672 aaKnown RBP20.59■□□□□ 0.89
KNOP1-205ENST00000568230 EFCC1Q9HA90 598 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 SLC4A4Q9Y6R1 1079 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 ZSWIM8A7E2V4 1837 aa20.59■□□□□ 0.89
KNOP1-205ENST00000568230 CCDC85CA6NKD9 419 aa20.58■□□□□ 0.89
KNOP1-205ENST00000568230 BCRP11274 1271 aa20.58■□□□□ 0.89
KNOP1-205ENST00000568230 LACTBP83111 547 aaPredicted RBP20.58■□□□□ 0.89
KNOP1-205ENST00000568230 MTMR2Q13614 643 aa20.58■□□□□ 0.89
KNOP1-205ENST00000568230 CERKLQ49MI3 558 aaPredicted RBP20.58■□□□□ 0.89
KNOP1-205ENST00000568230 LNPKQ9C0E8 428 aa20.58■□□□□ 0.89
KNOP1-205ENST00000568230 CPA4Q9UI42 421 aa20.58■□□□□ 0.89
KNOP1-205ENST00000568230 MYH8P13535 1937 aa20.58■□□□□ 0.89
KNOP1-205ENST00000568230 ABCB5Q2M3G0 1257 aa20.57■□□□□ 0.88
KNOP1-205ENST00000568230 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
KNOP1-205ENST00000568230 FSD1Q9BTV5 496 aa20.57■□□□□ 0.88
KNOP1-205ENST00000568230 SWAP70Q9UH65 585 aa20.57■□□□□ 0.88
KNOP1-205ENST00000568230 M0R2C6 588 aa20.56■□□□□ 0.88
KNOP1-205ENST00000568230 GPAA1O43292 621 aa20.56■□□□□ 0.88
KNOP1-205ENST00000568230 NUCB1Q02818 461 aa20.56■□□□□ 0.88
KNOP1-205ENST00000568230 ARHGEF6Q15052 776 aa20.56■□□□□ 0.88
KNOP1-205ENST00000568230 C12orf60Q5U649 245 aa20.56■□□□□ 0.88
KNOP1-205ENST00000568230 PNMA3Q9UL41 463 aa20.56■□□□□ 0.88
KNOP1-205ENST00000568230 C19orf81C9J6K1 198 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 USP17L10C9JJH3 530 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 USP17L12C9JPN9 530 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 USP17L21D6R901 530 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 GIMAP6Q6P9H5 292 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 CHD1LQ86WJ1 897 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 SLC44A5Q8NCS7 719 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 PTPN22Q9Y2R2 807 aa20.55■□□□□ 0.88
KNOP1-205ENST00000568230 CYP2D7A0A087X1C5 515 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 GSG1L2A8MUP6 293 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 PABPC4Q13310 644 aaKnown RBP eCLIP20.54■□□□□ 0.889e-6■■■■□ 24.7
KNOP1-205ENST00000568230 KIF22Q14807 665 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 ZMYM1Q5SVZ6 1142 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 SMCR8Q8TEV9 937 aaPredicted RBP20.54■□□□□ 0.88
KNOP1-205ENST00000568230 DYNLL2Q96FJ2 89 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 ARHGAP39Q9C0H5 1083 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
KNOP1-205ENST00000568230 ARPP21Q9UBL0 812 aaPredicted RBP20.54■□□□□ 0.88
KNOP1-205ENST00000568230 SMIM22K7EJ46 135 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 GNRH1P01148 92 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 GNAT2P19087 354 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 GUCY1A2P33402 732 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 RAB3GAP1Q15042 981 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 CTR9Q6PD62 1173 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 EVI5LQ96CN4 794 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 CABP5Q9NP86 173 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 CTGFP29279 349 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 HOXA7P31268 230 aaPredicted RBP20.53■□□□□ 0.88
KNOP1-205ENST00000568230 IRX6P78412 446 aaPredicted RBP20.53■□□□□ 0.88
KNOP1-205ENST00000568230 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 C16orf86Q6ZW13 317 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 TRIM47Q96LD4 638 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
KNOP1-205ENST00000568230 SEC62Q99442 399 aaKnown RBP20.53■□□□□ 0.88
KNOP1-205ENST00000568230 ASCC2Q9H1I8 757 aaPredicted RBP20.53■□□□□ 0.88
KNOP1-205ENST00000568230 EPB41L4AQ9HCS5 686 aaPredicted RBP20.53■□□□□ 0.88
KNOP1-205ENST00000568230 ROBO3Q96MS0 1386 aa20.52■□□□□ 0.88
KNOP1-205ENST00000568230 MGAMO43451 1857 aa20.52■□□□□ 0.88
KNOP1-205ENST00000568230 SEPT2Q15019 361 aa20.52■□□□□ 0.87
KNOP1-205ENST00000568230 USP17L2Q6R6M4 530 aa20.52■□□□□ 0.87
KNOP1-205ENST00000568230 TICAM2Q86XR7 235 aa20.52■□□□□ 0.87
KNOP1-205ENST00000568230 FEZ1Q99689 392 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms