RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 NRXN2Q9P2S2 1712 aa9.61□□□□□ -0.87
SMG1-214ENST00000568038 DDX60Q8IY21 1712 aaKnown RBP9.6□□□□□ -0.87
SMG1-214ENST00000568038 BNIP3LO60238 219 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
SMG1-214ENST00000568038 BMP4P12644 408 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 IFIT5Q13325 482 aaKnown RBP9.6□□□□□ -0.87
SMG1-214ENST00000568038 CCDC57Q2TAC2 916 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 C2CD5Q86YS7 1000 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 SIRT2Q8IXJ6 389 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 KLHDC4Q8TBB5 520 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
SMG1-214ENST00000568038 RPGRQ92834 1020 aaKnown RBP9.6□□□□□ -0.87
SMG1-214ENST00000568038 TNRC6CQ9HCJ0 1690 aaKnown RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 ANKRD18BA2A2Z9 1011 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 H0YIN7 160 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 BACH1O14867 736 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 HMMRO75330 724 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 CHRNA5P30532 468 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 MTX1Q13505 466 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 CRY2Q49AN0 593 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 TAF7LQ5H9L4 462 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 ERICH6BQ5W0A0 696 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 DDX46Q7L014 1031 aaKnown RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 ZNF622Q969S3 477 aaKnown RBP eCLIP9.59□□□□□ -0.87
SMG1-214ENST00000568038 RBM17Q96I25 401 aaKnown RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 ZCCHC2Q9C0B9 1178 aaKnown RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 CRISPLD1Q9H336 500 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
SMG1-214ENST00000568038 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 PA2G4Q9UQ80 394 aaKnown RBP9.59□□□□□ -0.87
SMG1-214ENST00000568038 RIC1Q4ADV7 1423 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 C10orf71Q711Q0 1435 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 LAMB2P55268 1798 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 ANKRD31Q8N7Z5 1873 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 A0A0G2JLW4 131 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 A0A1W2PNR3 127 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
SMG1-214ENST00000568038 IGHDP01880 384 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 SRGNP10124 158 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 DPEP1P16444 411 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 ATP4AP20648 1035 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 FGFR3P22607 806 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 RFX5P48382 616 aaPredicted RBP9.58□□□□□ -0.88
SMG1-214ENST00000568038 CTBSQ01459 385 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 ANKRD18AQ8IVF6 992 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 GALNT6Q8NCL4 622 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 SSH3Q8TE77 659 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 CCDC136Q96JN2 1154 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 CDC5LQ99459 802 aaKnown RBP9.58□□□□□ -0.88
SMG1-214ENST00000568038 SIL1Q9H173 461 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 RWDD1Q9H446 243 aaPredicted RBP9.58□□□□□ -0.88
SMG1-214ENST00000568038 PPP4R2Q9NY27 417 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 MYH3P11055 1940 aa9.58□□□□□ -0.88
SMG1-214ENST00000568038 C2CD2LO14523 706 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 OIP5O43482 229 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 SURF6O75683 361 aaKnown RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 NPR1P16066 1061 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 IGHMBP2P38935 993 aaKnown RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 PTPN12Q05209 780 aaKnown RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 GRAPQ13588 217 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 MTFR1Q15390 333 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 TBCELQ5QJ74 424 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 B4GALNT3Q6L9W6 998 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 KANK3Q6NY19 840 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 FIGNL1Q6PIW4 674 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 C1orf216Q8TAB5 229 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 CELF1Q92879 486 aaKnown RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 WWC3Q9ULE0 1092 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
SMG1-214ENST00000568038 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 CD2APQ9Y5K6 639 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 GJA3Q9Y6H8 435 aa9.57□□□□□ -0.88
SMG1-214ENST00000568038 TAF1P21675 1872 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 RTL9Q8NET4 1388 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 ATXN7O15265 892 aaPredicted RBP9.56□□□□□ -0.88
SMG1-214ENST00000568038 HOXA10P31260 410 aaPredicted RBP9.56□□□□□ -0.88
SMG1-214ENST00000568038 TGFB2P61812 414 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 G3BP1Q13283 466 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMG1-214ENST00000568038 OS9Q13438 667 aaPredicted RBP9.56□□□□□ -0.88
SMG1-214ENST00000568038 HDAC1Q13547 482 aaPredicted RBP9.56□□□□□ -0.88
SMG1-214ENST00000568038 LRRC24Q50LG9 513 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 STYK1Q6J9G0 422 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 LDHAL6AQ6ZMR3 332 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 TNS4Q8IZW8 715 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 BEND7Q8N7W2 519 aaPredicted RBP9.56□□□□□ -0.88
SMG1-214ENST00000568038 CRAMP1Q96RY5 1269 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 MPHOSPH8Q99549 860 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 PUS3Q9BZE2 481 aaKnown RBP9.56□□□□□ -0.88
SMG1-214ENST00000568038 BCL11AQ9H165 835 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 CNNM1Q9NRU3 951 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
SMG1-214ENST00000568038 DCDC2BA2VCK2 349 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
SMG1-214ENST00000568038 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms