RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 C8orf48Q96LL4 319 aa7.81□□□□□ -1.16
KARS-208ENST00000566772 CDC6Q99741 560 aa7.81□□□□□ -1.16
KARS-208ENST00000566772 SOX17Q9H6I2 414 aaPredicted RBP7.81□□□□□ -1.16
KARS-208ENST00000566772 ARHGEF4Q9NR80 690 aa7.81□□□□□ -1.16
KARS-208ENST00000566772 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
KARS-208ENST00000566772 KLF15Q9UIH9 416 aa7.81□□□□□ -1.16
KARS-208ENST00000566772 MRPS23Q9Y3D9 190 aaKnown RBP7.81□□□□□ -1.16
KARS-208ENST00000566772 CUX2O14529 1486 aa7.81□□□□□ -1.16
KARS-208ENST00000566772 CTSBP07858 339 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 SDSP20132 328 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 MAOBP27338 520 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 PMLP29590 882 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 POLR2BP30876 1174 aaKnown RBP7.8□□□□□ -1.16
KARS-208ENST00000566772 ADH7P40394 386 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 PDE4BQ07343 736 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 LAPTM4AQ15012 233 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 POU4F3Q15319 338 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 FNDC3BQ53EP0 1204 aaKnown RBP7.8□□□□□ -1.16
KARS-208ENST00000566772 CNNM4Q6P4Q7 775 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 TXNDC11Q6PKC3 985 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 ATL2Q8NHH9 583 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 WDR89Q96FK6 387 aaPredicted RBP7.8□□□□□ -1.16
KARS-208ENST00000566772 CCDC136Q96JN2 1154 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 CORO1BQ9BR76 489 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 RUSC1Q9BVN2 902 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 TARS2Q9BW92 718 aaKnown RBP7.8□□□□□ -1.16
KARS-208ENST00000566772 KRT82Q9NSB4 513 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 CSADQ9Y600 493 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 TACC3Q9Y6A5 838 aa7.8□□□□□ -1.16
KARS-208ENST00000566772 CYP11A1P05108 521 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 ARAFP10398 606 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 BMP4P12644 408 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 LIG1P18858 919 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 GRK4P32298 578 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 TTF1Q15361 905 aaPredicted RBP7.79□□□□□ -1.16
KARS-208ENST00000566772 PSAPL1Q6NUJ1 521 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 STRA8Q7Z7C7 330 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 WDR75Q8IWA0 830 aaKnown RBP7.79□□□□□ -1.16
KARS-208ENST00000566772 CCAR1Q8IX12 1150 aaKnown RBP7.79□□□□□ -1.16
KARS-208ENST00000566772 AFAP1L2Q8N4X5 818 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 NRSN2Q9GZP1 204 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 FAM86C1Q9NVL1 165 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 FRRS1LQ9P0K9 344 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
KARS-208ENST00000566772 TRBV23-1A0A0A0MS06 115 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 AGRPO00253 132 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 PGRP06401 933 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 RAG1P15918 1043 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 GUCY2FP51841 1108 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 C19orf57Q0VDD7 668 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 NFE2Q16621 373 aaPredicted RBP7.78□□□□□ -1.16
KARS-208ENST00000566772 IL22RA1Q8N6P7 574 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 MORC4Q8TE76 937 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 ZNF526Q8TF50 670 aaPredicted RBP7.78□□□□□ -1.16
KARS-208ENST00000566772 TTC9Q92623 222 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 ACSF2Q96CM8 615 aaPredicted RBP7.78□□□□□ -1.16
KARS-208ENST00000566772 SUSD2Q9UGT4 822 aa7.78□□□□□ -1.16
KARS-208ENST00000566772 TRAV20A0A0B4J274 112 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 LINC01387J3KSC0 135 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 TP53P04637 393 aaPredicted RBP7.77□□□□□ -1.17
KARS-208ENST00000566772 ARL4DP49703 201 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 PDE3AQ14432 1141 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 LRRTM3Q86VH5 581 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 PPFIBP1Q86W92 1011 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 SCUBE1Q8IWY4 988 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 IPO9Q96P70 1041 aaKnown RBP7.77□□□□□ -1.17
KARS-208ENST00000566772 ADAM30Q9UKF2 790 aa7.77□□□□□ -1.17
KARS-208ENST00000566772 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 TSPAN6O43657 245 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 KATNA1O75449 491 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 EYA4O95677 639 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 EPHB1P54762 984 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 PIP4K2BP78356 416 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 HSP90AA2PQ14568 343 aaPredicted RBP7.76□□□□□ -1.17
KARS-208ENST00000566772 LRRC41Q15345 812 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 WWC2Q6AWC2 1192 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 FOXR1Q6PIV2 292 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 TMEM192Q8IY95 271 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 LEO1Q8WVC0 666 aaPredicted RBP7.76□□□□□ -1.17
KARS-208ENST00000566772 APBA2Q99767 749 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 LGR4Q9BXB1 951 aa7.76□□□□□ -1.17
KARS-208ENST00000566772 DNAJC25-GNG10A0A024R161 153 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 ANKRD34BA5PLL1 514 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 DGAT1O75907 488 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
KARS-208ENST00000566772 BAG6P46379 1132 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
KARS-208ENST00000566772 RHBDL3P58872 404 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 PPP2R2AP63151 447 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 GRIK5Q16478 980 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 KIF4BQ2VIQ3 1234 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 TDRD10Q5VZ19 366 aaKnown RBP7.75□□□□□ -1.17
KARS-208ENST00000566772 DDX46Q7L014 1031 aaKnown RBP7.75□□□□□ -1.17
KARS-208ENST00000566772 CACTIN-AS1Q8N1I8 211 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 CRIPAKQ8N1N5 446 aa7.75□□□□□ -1.17
KARS-208ENST00000566772 VWA5B2Q8N398 1253 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms