RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ATAD5Q96QE3 1844 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 MTMR2Q13614 643 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 TTC6Q86TZ1 520 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 CLASRPQ8N2M8 674 aaKnown RBP33.67■■■□□ 2.98
UBFD1-206ENST00000566669 MAGEB6Q8N7X4 407 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 GTF3C2Q8WUA4 911 aaPredicted RBP33.67■■■□□ 2.98
UBFD1-206ENST00000566669 SHISA4Q96DD7 197 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 EHD4Q9H223 541 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 DNAJC18Q9H819 358 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 FOCADQ5VW36 1801 aa33.67■■■□□ 2.98
UBFD1-206ENST00000566669 HABP4Q5JVS0 413 aaKnown RBP33.66■■■□□ 2.98
UBFD1-206ENST00000566669 KIF1BPQ96EK5 621 aa33.66■■■□□ 2.98
UBFD1-206ENST00000566669 MORF4L1Q9UBU8 362 aa33.66■■■□□ 2.98
UBFD1-206ENST00000566669 ZBTB21Q9ULJ3 1066 aa33.66■■■□□ 2.98
UBFD1-206ENST00000566669 RHPN1Q8TCX5 695 aa33.65■■■□□ 2.98
UBFD1-206ENST00000566669 INHAP05111 366 aa33.64■■■□□ 2.98
UBFD1-206ENST00000566669 DYNLL1P63167 89 aaKnown RBP33.64■■■□□ 2.98
UBFD1-206ENST00000566669 U2AF1L4Q8WU68 220 aaKnown RBP33.64■■■□□ 2.98
UBFD1-206ENST00000566669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.64■■■□□ 2.98
UBFD1-206ENST00000566669 SERPINB13Q9UIV8 391 aa33.64■■■□□ 2.98
UBFD1-206ENST00000566669 SGPL1O95470 568 aa33.63■■■□□ 2.97
UBFD1-206ENST00000566669 SAP30BPQ9UHR5 308 aaKnown RBP33.63■■■□□ 2.97
UBFD1-206ENST00000566669 TATDN1Q6P1N9 297 aa33.62■■■□□ 2.97
UBFD1-206ENST00000566669 UBE2Q1Q7Z7E8 422 aa33.62■■■□□ 2.97
UBFD1-206ENST00000566669 MIGA1Q8NAN2 632 aa33.62■■■□□ 2.97
UBFD1-206ENST00000566669 UNC93B1Q9H1C4 597 aa33.62■■■□□ 2.97
UBFD1-206ENST00000566669 SIPA1L1O43166 1804 aa33.62■■■□□ 2.97
UBFD1-206ENST00000566669 RAB11FIP3O75154 756 aa33.61■■■□□ 2.97
UBFD1-206ENST00000566669 TAOK2Q9UL54 1235 aa33.61■■■□□ 2.97
UBFD1-206ENST00000566669 CDK5RAP2Q96SN8 1893 aa33.61■■■□□ 2.97
UBFD1-206ENST00000566669 GDF11O95390 407 aa33.6■■■□□ 2.97
UBFD1-206ENST00000566669 ELNP15502 786 aa33.6■■■□□ 2.97
UBFD1-206ENST00000566669 USP17L2Q6R6M4 530 aa33.6■■■□□ 2.97
UBFD1-206ENST00000566669 IFIT2P09913 472 aaKnown RBP33.59■■■□□ 2.97
UBFD1-206ENST00000566669 GPRC5AQ8NFJ5 357 aa33.59■■■□□ 2.97
UBFD1-206ENST00000566669 DPF3Q92784 378 aa33.59■■■□□ 2.97
UBFD1-206ENST00000566669 ANTXR1Q9H6X2 564 aa33.59■■■□□ 2.97
UBFD1-206ENST00000566669 IL1RAPL2Q9NP60 686 aa33.59■■■□□ 2.97
UBFD1-206ENST00000566669 PAK6Q9NQU5 681 aaPredicted RBP33.59■■■□□ 2.97
UBFD1-206ENST00000566669 ZBTB40Q9NUA8 1239 aa33.59■■■□□ 2.97
UBFD1-206ENST00000566669 FARP2O94887 1054 aaPredicted RBP33.58■■■□□ 2.97
UBFD1-206ENST00000566669 HMGCRP04035 888 aa33.58■■■□□ 2.97
UBFD1-206ENST00000566669 USP14P54578 494 aa33.58■■■□□ 2.97
UBFD1-206ENST00000566669 HERVK_113P62684 666 aa33.58■■■□□ 2.97
UBFD1-206ENST00000566669 MAGEB6P1A0A0J9YX57 407 aa33.57■■■□□ 2.96
UBFD1-206ENST00000566669 SOCS4Q8WXH5 440 aa33.57■■■□□ 2.96
UBFD1-206ENST00000566669 CRNKL1Q9BZJ0 848 aaKnown RBP33.57■■■□□ 2.96
UBFD1-206ENST00000566669 CABP5Q9NP86 173 aa33.57■■■□□ 2.96
UBFD1-206ENST00000566669 MYO5AQ9Y4I1 1855 aaKnown RBP33.56■■■□□ 2.96
UBFD1-206ENST00000566669 GH2P01242 217 aa33.56■■■□□ 2.96
UBFD1-206ENST00000566669 MAPK4P31152 587 aa33.56■■■□□ 2.96
UBFD1-206ENST00000566669 JAG1P78504 1218 aa33.56■■■□□ 2.96
UBFD1-206ENST00000566669 SLC9C2Q5TAH2 1124 aa33.56■■■□□ 2.96
UBFD1-206ENST00000566669 TRMT44Q8IYL2 757 aaKnown RBP33.56■■■□□ 2.96
UBFD1-206ENST00000566669 C12orf42Q96LP6 360 aa33.56■■■□□ 2.96
UBFD1-206ENST00000566669 P2RX7Q99572 595 aaKnown RBP33.56■■■□□ 2.96
UBFD1-206ENST00000566669 RIOK1Q9BRS2 568 aaKnown RBP33.56■■■□□ 2.96
UBFD1-206ENST00000566669 NR2E3Q9Y5X4 410 aa33.56■■■□□ 2.96
UBFD1-206ENST00000566669 H0YGN5 161 aa33.55■■■□□ 2.96
UBFD1-206ENST00000566669 CERKLQ49MI3 558 aaPredicted RBP33.55■■■□□ 2.96
UBFD1-206ENST00000566669 GJD2Q9UKL4 321 aa33.55■■■□□ 2.96
UBFD1-206ENST00000566669 NDUFB9Q9Y6M9 179 aa33.55■■■□□ 2.96
UBFD1-206ENST00000566669 CEP290O15078 2479 aa33.54■■■□□ 2.96
UBFD1-206ENST00000566669 TFRCP02786 760 aaKnown RBP33.54■■■□□ 2.96
UBFD1-206ENST00000566669 CCAR1Q8IX12 1150 aaKnown RBP33.54■■■□□ 2.96
UBFD1-206ENST00000566669 FEZ1Q99689 392 aa33.54■■■□□ 2.96
UBFD1-206ENST00000566669 XRCC5P13010 732 aaKnown RBP33.53■■■□□ 2.96
UBFD1-206ENST00000566669 PDE3AQ14432 1141 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 ABCB5Q2M3G0 1257 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 DEFB118Q96PH6 123 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 NUDT12Q9BQG2 462 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 KIAA1683Q9H0B3 1180 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 CRISPLD2Q9H0B8 497 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 COG6Q9Y2V7 657 aa33.53■■■□□ 2.96
UBFD1-206ENST00000566669 POLR3DP05423 398 aaPredicted RBP33.52■■■□□ 2.96
UBFD1-206ENST00000566669 PDE6AP16499 860 aa33.52■■■□□ 2.96
UBFD1-206ENST00000566669 ANKLE1Q8NAG6 615 aa33.52■■■□□ 2.96
UBFD1-206ENST00000566669 EMILIN3Q9NT22 766 aa33.52■■■□□ 2.96
UBFD1-206ENST00000566669 RCAN3Q9UKA8 241 aa33.52■■■□□ 2.96
UBFD1-206ENST00000566669 RPTORQ8N122 1335 aa33.52■■■□□ 2.96
UBFD1-206ENST00000566669 MYH1P12882 1939 aa33.51■■■□□ 2.96
UBFD1-206ENST00000566669 USP17L15C9J2P7 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L13C9JLJ4 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L11C9JVI0 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L18D6R9N7 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L22D6RA61 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L17D6RBQ6 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L19D6RCP7 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L20D6RJB6 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 USP17L24Q0WX57 530 aa33.51■■■□□ 2.95
UBFD1-206ENST00000566669 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.51■■■□□ 2.95
UBFD1-206ENST00000566669 ERVK-9P63128 1117 aa33.5■■■□□ 2.95
UBFD1-206ENST00000566669 ERVK-24P63145 666 aa33.5■■■□□ 2.95
UBFD1-206ENST00000566669 CCNA1P78396 465 aa33.5■■■□□ 2.95
UBFD1-206ENST00000566669 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.5■■■□□ 2.95
UBFD1-206ENST00000566669 HMX1Q9NP08 348 aaPredicted RBP33.5■■■□□ 2.95
UBFD1-206ENST00000566669 COLQQ9Y215 455 aaPredicted RBP33.5■■■□□ 2.95
UBFD1-206ENST00000566669 RAB3GAP1Q15042 981 aa33.49■■■□□ 2.95
UBFD1-206ENST00000566669 DNAJC2Q99543 621 aaKnown RBP33.49■■■□□ 2.95
UBFD1-206ENST00000566669 RBPJLQ9UBG7 517 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms