RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 CACNB3P54284 484 aa12.54□□□□□ -0.4
PDXDC1-214ENST00000566633 PPP4CP60510 307 aa12.54□□□□□ -0.4
PDXDC1-214ENST00000566633 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
PDXDC1-214ENST00000566633 KRT23Q9C075 422 aa12.54□□□□□ -0.4
PDXDC1-214ENST00000566633 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
PDXDC1-214ENST00000566633 PIM2Q9P1W9 311 aa12.54□□□□□ -0.4
PDXDC1-214ENST00000566633 ZBTB22O15209 634 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 CTAGE5O15320 804 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 TERF1P54274 439 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 TTC12Q9H892 705 aaPredicted RBP12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 ME1P48163 572 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 DACT2Q5SW24 774 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 RNF41Q9H4P4 317 aaPredicted RBP12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 PCDHA7Q9UN72 937 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
PDXDC1-214ENST00000566633 CAVIN2O95810 425 aa12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 CMTR1Q8N1G2 835 aaKnown RBP12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 TMEM87BQ96K49 555 aa12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 GJB4Q9NTQ9 266 aa12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.4
PDXDC1-214ENST00000566633 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 USP17L3A6NCW0 530 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 USP17L4A6NCW7 530 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 TPM2P07951 284 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 CDC27P30260 824 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 PTGER2P43116 358 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 ZNF165P49910 485 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 C12orf60Q5U649 245 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 ADALQ6DHV7 355 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 APOA5Q6Q788 366 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 USP17L1Q7RTZ2 530 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 ESR2Q92731 530 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 DDX4Q9NQI0 724 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
PDXDC1-214ENST00000566633 UBE2Q2LH0YL09 131 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 TGFB2P61812 414 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 CC2D2BQ6DHV5 1058 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 APOBEC3HQ6NTF7 200 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 NUP133Q8WUM0 1156 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 UBAC1Q9BSL1 405 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 CLIC4Q9Y696 253 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 GAKO14976 1311 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 TNKSO95271 1327 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 FLT1P17948 1338 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 A0A1W2PQ27 194 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 A0A1W2PQ64 194 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 A0A1W2PQD8 194 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 CRKP46108 304 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 NFIAQ12857 509 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 WTAPQ15007 396 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 SGMS1Q86VZ5 419 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 QSER1Q2KHR3 1735 aa12.51□□□□□ -0.41
PDXDC1-214ENST00000566633 KIF28PB7ZC32 967 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 TPM3P06753 285 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 TCP10Q12799 353 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 PHKBQ93100 1093 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 TEKT1Q969V4 418 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 ERICH2A1L162 156 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 ZBTB43O43298 467 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 CDKL5O76039 1030 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 YEATS4O95619 227 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 LIFRP42702 1097 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 SBK1Q52WX2 424 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 CDC42EP5Q6NZY7 148 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 ZFPM1Q8IX07 1006 aa12.5□□□□□ -0.41
PDXDC1-214ENST00000566633 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms