RNA–Protein interactions for RNA: ENST00000566547.1

GGA2-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-206ENST00000566547 ERC1Q8IUD2 1116 aa27.18■■□□□ 1.94
GGA2-206ENST00000566547 ZBTB21Q9ULJ3 1066 aa27.18■■□□□ 1.94
GGA2-206ENST00000566547 HLA-DOAP06340 250 aa27.17■■□□□ 1.94
GGA2-206ENST00000566547 USP5P45974 858 aa27.17■■□□□ 1.94
GGA2-206ENST00000566547 BACE1P56817 501 aa27.17■■□□□ 1.94
GGA2-206ENST00000566547 PABPC4Q13310 644 aaKnown RBP eCLIP27.17■■□□□ 1.94
GGA2-206ENST00000566547 RHPN1Q8TCX5 695 aa27.17■■□□□ 1.94
GGA2-206ENST00000566547 COA7Q96BR5 231 aa27.17■■□□□ 1.94
GGA2-206ENST00000566547 COG6Q9Y2V7 657 aa27.17■■□□□ 1.94
GGA2-206ENST00000566547 H0YGN5 161 aa27.16■■□□□ 1.94
GGA2-206ENST00000566547 NKX2-3Q8TAU0 364 aa27.16■■□□□ 1.94
GGA2-206ENST00000566547 GCLCP48506 637 aaPredicted RBP27.15■■□□□ 1.94
GGA2-206ENST00000566547 IRF5Q13568 498 aa27.15■■□□□ 1.94
GGA2-206ENST00000566547 PXYLP1Q8TE99 480 aa27.15■■□□□ 1.94
GGA2-206ENST00000566547 U2AF1L4Q8WU68 220 aaKnown RBP27.15■■□□□ 1.94
GGA2-206ENST00000566547 TMOD4Q9NZQ9 345 aa27.15■■□□□ 1.94
GGA2-206ENST00000566547 IGSF3O75054 1194 aa27.14■■□□□ 1.94
GGA2-206ENST00000566547 IRX3P78415 501 aaPredicted RBP27.14■■□□□ 1.94
GGA2-206ENST00000566547 MAP3K12Q12852 859 aa27.14■■□□□ 1.94
GGA2-206ENST00000566547 SIRT2Q8IXJ6 389 aa27.14■■□□□ 1.94
GGA2-206ENST00000566547 P2RX7Q99572 595 aaKnown RBP27.14■■□□□ 1.94
GGA2-206ENST00000566547 USP17L10C9JJH3 530 aa27.13■■□□□ 1.93
GGA2-206ENST00000566547 GH2P01242 217 aa27.13■■□□□ 1.93
GGA2-206ENST00000566547 UBE2Q1Q7Z7E8 422 aa27.13■■□□□ 1.93
GGA2-206ENST00000566547 DPF3Q92784 378 aa27.13■■□□□ 1.93
GGA2-206ENST00000566547 COLQQ9Y215 455 aaPredicted RBP27.13■■□□□ 1.93
GGA2-206ENST00000566547 RANBP2P49792 3224 aaKnown RBP27.13■■□□□ 1.93
GGA2-206ENST00000566547 PLXNB2O15031 1838 aa27.13■■□□□ 1.93
GGA2-206ENST00000566547 HSP90AB4PQ58FF6 505 aa27.12■■□□□ 1.93
GGA2-206ENST00000566547 RCAN3Q9UKA8 241 aa27.12■■□□□ 1.93
GGA2-206ENST00000566547 SGPL1O95470 568 aa27.11■■□□□ 1.93
GGA2-206ENST00000566547 ZYXQ15942 572 aaKnown RBP27.11■■□□□ 1.93
GGA2-206ENST00000566547 DEFB118Q96PH6 123 aa27.11■■□□□ 1.93
GGA2-206ENST00000566547 RIOK1Q9BRS2 568 aaKnown RBP27.11■■□□□ 1.93
GGA2-206ENST00000566547 TXNRD2Q9NNW7 524 aa27.11■■□□□ 1.93
GGA2-206ENST00000566547 EMILIN3Q9NT22 766 aa27.11■■□□□ 1.93
GGA2-206ENST00000566547 ZBTB40Q9NUA8 1239 aa27.11■■□□□ 1.93
GGA2-206ENST00000566547 C19orf81C9J6K1 198 aa27.1■■□□□ 1.93
GGA2-206ENST00000566547 HOXA7P31268 230 aaPredicted RBP27.1■■□□□ 1.93
GGA2-206ENST00000566547 HERVK_113P62684 666 aa27.1■■□□□ 1.93
GGA2-206ENST00000566547 EVX2Q03828 476 aa27.1■■□□□ 1.93
GGA2-206ENST00000566547 EDC3Q96F86 508 aaKnown RBP27.1■■□□□ 1.93
GGA2-206ENST00000566547 DNAJC2Q99543 621 aaKnown RBP27.1■■□□□ 1.93
GGA2-206ENST00000566547 MORF4L1Q9UBU8 362 aa27.1■■□□□ 1.93
GGA2-206ENST00000566547 GJD2Q9UKL4 321 aa27.1■■□□□ 1.93
GGA2-206ENST00000566547 NAV1Q8NEY1 1877 aa27.1■■□□□ 1.93
GGA2-206ENST00000566547 DDX60LQ5H9U9 1706 aaKnown RBP27.1■■□□□ 1.93
GGA2-206ENST00000566547 GOLIM4O00461 696 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 FARP2O94887 1054 aaPredicted RBP27.09■■□□□ 1.93
GGA2-206ENST00000566547 PLCD1P51178 756 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 TRIM32Q13049 653 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 TATDN1Q6P1N9 297 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 CLASRPQ8N2M8 674 aaKnown RBP27.09■■□□□ 1.93
GGA2-206ENST00000566547 KIF1BPQ96EK5 621 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 GINM1Q9NU53 330 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 SERPINB13Q9UIV8 391 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 DDX19BQ9UMR2 479 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 TRIOBPQ9H2D6 2365 aa27.09■■□□□ 1.93
GGA2-206ENST00000566547 MAGEB6P1A0A0J9YX57 407 aa27.08■■□□□ 1.93
GGA2-206ENST00000566547 TFRCP02786 760 aaKnown RBP27.08■■□□□ 1.93
GGA2-206ENST00000566547 PDE6AP16499 860 aa27.08■■□□□ 1.93
GGA2-206ENST00000566547 SLC9C2Q5TAH2 1124 aa27.08■■□□□ 1.93
GGA2-206ENST00000566547 CERS3Q8IU89 383 aa27.08■■□□□ 1.93
GGA2-206ENST00000566547 RPAP2Q8IXW5 612 aaPredicted RBP27.08■■□□□ 1.93
GGA2-206ENST00000566547 IFIT2P09913 472 aaKnown RBP27.07■■□□□ 1.92
GGA2-206ENST00000566547 RAB3GAP1Q15042 981 aa27.07■■□□□ 1.92
GGA2-206ENST00000566547 POTEEQ6S8J3 1075 aa27.07■■□□□ 1.92
GGA2-206ENST00000566547 EHD4Q9H223 541 aa27.07■■□□□ 1.92
GGA2-206ENST00000566547 CHMP4BQ9H444 224 aaKnown RBP27.07■■□□□ 1.92
GGA2-206ENST00000566547 PAK6Q9NQU5 681 aaPredicted RBP27.07■■□□□ 1.92
GGA2-206ENST00000566547 RBPJLQ9UBG7 517 aa27.07■■□□□ 1.92
GGA2-206ENST00000566547 ZNF532Q9HCE3 1301 aa27.07■■□□□ 1.92
GGA2-206ENST00000566547 SZT2Q5T011 3432 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 TTF1Q15361 905 aaPredicted RBP27.06■■□□□ 1.92
GGA2-206ENST00000566547 Q3C1V9 767 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 SLFNL1Q499Z3 407 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 CERKLQ49MI3 558 aaPredicted RBP27.06■■□□□ 1.92
GGA2-206ENST00000566547 USP17L2Q6R6M4 530 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 TTC6Q86TZ1 520 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 GPRC5AQ8NFJ5 357 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 PAGR1Q9BTK6 254 aa27.06■■□□□ 1.92
GGA2-206ENST00000566547 HMMRO75330 724 aa27.05■■□□□ 1.92
GGA2-206ENST00000566547 CYP2B6P20813 491 aa27.05■■□□□ 1.92
GGA2-206ENST00000566547 SHMT1P34896 483 aa27.05■■□□□ 1.92
GGA2-206ENST00000566547 C20orf194Q5TEA3 1177 aa27.05■■□□□ 1.92
GGA2-206ENST00000566547 ACER1Q8TDN7 264 aa27.05■■□□□ 1.92
GGA2-206ENST00000566547 FEZ1Q99689 392 aa27.05■■□□□ 1.92
GGA2-206ENST00000566547 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.05■■□□□ 1.923e-6■■□□□ 14.1
GGA2-206ENST00000566547 HMGCRP04035 888 aa27.04■■□□□ 1.92
GGA2-206ENST00000566547 POLR3DP05423 398 aaPredicted RBP27.04■■□□□ 1.92
GGA2-206ENST00000566547 ABCB5Q2M3G0 1257 aa27.04■■□□□ 1.92
GGA2-206ENST00000566547 CHRDL2Q6WN34 429 aa27.04■■□□□ 1.92
GGA2-206ENST00000566547 HTATIP2Q9BUP3 242 aa27.04■■□□□ 1.92
GGA2-206ENST00000566547 TCRBV5S4A2TA0A5A2 114 aa27.03■■□□□ 1.92
GGA2-206ENST00000566547 FXR1P51114 621 aaKnown RBP eCLIP27.03■■□□□ 1.92
GGA2-206ENST00000566547 LCORLQ8N3X6 602 aa27.03■■□□□ 1.92
GGA2-206ENST00000566547 SDR42E1Q8WUS8 393 aa27.03■■□□□ 1.92
GGA2-206ENST00000566547 TRIB2Q92519 343 aa27.03■■□□□ 1.92
GGA2-206ENST00000566547 PORCNQ9H237 461 aa27.03■■□□□ 1.92
GGA2-206ENST00000566547 BOLA2Q9H3K6 86 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms