RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MTMR2Q13614 643 aa22.28■■□□□ 1.16
USB1-213ENST00000566292 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.28■■□□□ 1.16
USB1-213ENST00000566292 ASCC2Q9H1I8 757 aaPredicted RBP22.28■■□□□ 1.16
USB1-213ENST00000566292 ZBTB21Q9ULJ3 1066 aa22.28■■□□□ 1.16
USB1-213ENST00000566292 RAB11FIP3O75154 756 aa22.27■■□□□ 1.16
USB1-213ENST00000566292 IFIT2P09913 472 aaKnown RBP22.27■■□□□ 1.16
USB1-213ENST00000566292 TTF1Q15361 905 aaPredicted RBP22.27■■□□□ 1.16
USB1-213ENST00000566292 FAM110CQ1W6H9 321 aa22.27■■□□□ 1.16
USB1-213ENST00000566292 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
USB1-213ENST00000566292 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
USB1-213ENST00000566292 GINM1Q9NU53 330 aa22.27■■□□□ 1.16
USB1-213ENST00000566292 MYH7P12883 1935 aa22.26■■□□□ 1.15
USB1-213ENST00000566292 TNPO2O14787 897 aaKnown RBP22.26■■□□□ 1.15
USB1-213ENST00000566292 PDE6AP16499 860 aa22.26■■□□□ 1.15
USB1-213ENST00000566292 FLT3LGP49771 235 aa22.26■■□□□ 1.15
USB1-213ENST00000566292 PABPC4Q13310 644 aaKnown RBP eCLIP22.26■■□□□ 1.15
USB1-213ENST00000566292 SHISA4Q96DD7 197 aa22.26■■□□□ 1.15
USB1-213ENST00000566292 DNAJC2Q99543 621 aaKnown RBP22.26■■□□□ 1.15
USB1-213ENST00000566292 PLXNB2O15031 1838 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 GOLIM4O00461 696 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 GCLCP48506 637 aaPredicted RBP22.25■■□□□ 1.15
USB1-213ENST00000566292 PDE3AQ14432 1141 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 SLC9C2Q5TAH2 1124 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 TATDN1Q6P1N9 297 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 SLAIN1Q8ND83 568 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 EDC3Q96F86 508 aaKnown RBP22.25■■□□□ 1.15
USB1-213ENST00000566292 EHD4Q9H223 541 aa22.25■■□□□ 1.15
USB1-213ENST00000566292 MAGEB6P1A0A0J9YX57 407 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 TCRBV5S4A2TA0A5A2 114 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 C19orf81C9J6K1 198 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 ADCY3O60266 1144 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 CCL5P13501 91 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 TMOD4Q9NZQ9 345 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 BIN2Q9UBW5 565 aaPredicted RBP22.24■■□□□ 1.15
USB1-213ENST00000566292 SERPINB13Q9UIV8 391 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 ZNF532Q9HCE3 1301 aa22.24■■□□□ 1.15
USB1-213ENST00000566292 USP17L10C9JJH3 530 aa22.23■■□□□ 1.15
USB1-213ENST00000566292 GH2P01242 217 aa22.23■■□□□ 1.15
USB1-213ENST00000566292 ELNP15502 786 aa22.23■■□□□ 1.15
USB1-213ENST00000566292 HOXA7P31268 230 aaPredicted RBP22.23■■□□□ 1.15
USB1-213ENST00000566292 PLCD1P51178 756 aa22.23■■□□□ 1.15
USB1-213ENST00000566292 UBXN2AP68543 259 aa22.23■■□□□ 1.15
USB1-213ENST00000566292 IRF5Q13568 498 aa22.23■■□□□ 1.15
USB1-213ENST00000566292 TTC6Q86TZ1 520 aa22.22■■□□□ 1.15
USB1-213ENST00000566292 COA7Q96BR5 231 aa22.22■■□□□ 1.15
USB1-213ENST00000566292 P2RX7Q99572 595 aaKnown RBP22.22■■□□□ 1.15
USB1-213ENST00000566292 BOLA2Q9H3K6 86 aa22.22■■□□□ 1.15
USB1-213ENST00000566292 MYH8P13535 1937 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 BAZ2AQ9UIF9 1905 aaKnown RBP22.21■■□□□ 1.15
USB1-213ENST00000566292 GJB1P08034 283 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 IRX3P78415 501 aaPredicted RBP22.21■■□□□ 1.15
USB1-213ENST00000566292 PXYLP1Q8TE99 480 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 RNF208Q9H0X6 261 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 UNC93B1Q9H1C4 597 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 EMILIN3Q9NT22 766 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 MORF4L1Q9UBU8 362 aa22.21■■□□□ 1.15
USB1-213ENST00000566292 PEX10O60683 326 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 ATP5JP18859 108 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 SHMT1P34896 483 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 GJA8P48165 433 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 EVX2Q03828 476 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 SLFNL1Q499Z3 407 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 LCORLQ8N3X6 602 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 CRNKL1Q9BZJ0 848 aaKnown RBP22.2■■□□□ 1.14
USB1-213ENST00000566292 PAG1Q9NWQ8 432 aa22.2■■□□□ 1.14
USB1-213ENST00000566292 CEP290O15078 2479 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 INHAP05111 366 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 HERVK_113P62684 666 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 GABPAQ06546 454 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 CERKLQ49MI3 558 aaPredicted RBP22.19■■□□□ 1.14
USB1-213ENST00000566292 NKX2-3Q8TAU0 364 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 SDR42E1Q8WUS8 393 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 TXNRD2Q9NNW7 524 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 GJD2Q9UKL4 321 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 TAOK2Q9UL54 1235 aa22.19■■□□□ 1.14
USB1-213ENST00000566292 SMARCA5O60264 1052 aaPredicted RBP22.18■■□□□ 1.14
USB1-213ENST00000566292 POLR3DP05423 398 aaPredicted RBP22.18■■□□□ 1.14
USB1-213ENST00000566292 ADD2P35612 726 aa22.18■■□□□ 1.14
USB1-213ENST00000566292 ABCB5Q2M3G0 1257 aa22.18■■□□□ 1.14
USB1-213ENST00000566292 USP17L2Q6R6M4 530 aa22.18■■□□□ 1.14
USB1-213ENST00000566292 HAUS7Q99871 368 aa22.18■■□□□ 1.14
USB1-213ENST00000566292 LRRCC1Q9C099 1032 aa22.18■■□□□ 1.14
USB1-213ENST00000566292 DCP1AQ9NPI6 582 aaPredicted RBP22.18■■□□□ 1.14
USB1-213ENST00000566292 CHGBP05060 677 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 RAB3GAP1Q15042 981 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 POTEEQ6S8J3 1075 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 UBE2Q1Q7Z7E8 422 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 U2AF1L4Q8WU68 220 aaKnown RBP22.17■■□□□ 1.14
USB1-213ENST00000566292 C12orf42Q96LP6 360 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 ARMT1Q9H993 441 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 MCM9Q9NXL9 1143 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 RBPJLQ9UBG7 517 aa22.17■■□□□ 1.14
USB1-213ENST00000566292 GUCY1A2P33402 732 aa22.16■■□□□ 1.14
USB1-213ENST00000566292 ZYXQ15942 572 aaKnown RBP22.16■■□□□ 1.14
USB1-213ENST00000566292 ACER1Q8TDN7 264 aa22.16■■□□□ 1.14
USB1-213ENST00000566292 PRKAB2O43741 272 aa22.15■■□□□ 1.14
USB1-213ENST00000566292 CYP2D6P10635 497 aa22.15■■□□□ 1.14
USB1-213ENST00000566292 GPRC5AQ8NFJ5 357 aa22.15■■□□□ 1.14
USB1-213ENST00000566292 FEZ1Q99689 392 aa22.15■■□□□ 1.14
USB1-213ENST00000566292 KIAA1683Q9H0B3 1180 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms