RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ZNF384Q8TF68 577 aa19.68■□□□□ 0.74
RAB40C-210ENST00000566290 MYOZ2Q9NPC6 264 aa19.68■□□□□ 0.74
RAB40C-210ENST00000566290 ATP8A2Q9NTI2 1148 aa19.68■□□□□ 0.74
RAB40C-210ENST00000566290 IQSEC3Q9UPP2 1182 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-210ENST00000566290 FAM205AQ6ZU69 1335 aa19.68■□□□□ 0.74
RAB40C-210ENST00000566290 HAND2P61296 217 aa19.67■□□□□ 0.74
RAB40C-210ENST00000566290 MECOMQ03112 1051 aa19.67■□□□□ 0.74
RAB40C-210ENST00000566290 LARP1BQ659C4 914 aaKnown RBP19.67■□□□□ 0.74
RAB40C-210ENST00000566290 ADGRA1Q86SQ6 560 aa19.67■□□□□ 0.74
RAB40C-210ENST00000566290 TBC1D22AQ8WUA7 517 aa19.67■□□□□ 0.74
RAB40C-210ENST00000566290 LARP6Q9BRS8 491 aaKnown RBP19.67■□□□□ 0.74
RAB40C-210ENST00000566290 HDAC9Q9UKV0 1011 aa19.67■□□□□ 0.74
RAB40C-210ENST00000566290 SCAF8Q9UPN6 1271 aaKnown RBP19.67■□□□□ 0.74
RAB40C-210ENST00000566290 SUGT1Q9Y2Z0 365 aa19.67■□□□□ 0.74
RAB40C-210ENST00000566290 DDX60LQ5H9U9 1706 aaKnown RBP19.67■□□□□ 0.74
RAB40C-210ENST00000566290 TDO2P48775 406 aa19.66■□□□□ 0.74
RAB40C-210ENST00000566290 PPP4CP60510 307 aa19.66■□□□□ 0.74
RAB40C-210ENST00000566290 APOBRQ0VD83 1088 aa19.66■□□□□ 0.74
RAB40C-210ENST00000566290 NBPF9Q3BBW0 867 aa19.66■□□□□ 0.74
RAB40C-210ENST00000566290 SBK1Q52WX2 424 aa19.66■□□□□ 0.74
RAB40C-210ENST00000566290 ZNF296Q8WUU4 475 aaPredicted RBP19.66■□□□□ 0.74
RAB40C-210ENST00000566290 CRNKL1Q9BZJ0 848 aaKnown RBP19.66■□□□□ 0.74
RAB40C-210ENST00000566290 PCDHAC2Q9Y5I4 1007 aa19.66■□□□□ 0.74
RAB40C-210ENST00000566290 FSD2A1L4K1 749 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 LDHCP07864 332 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 MFSD6Q6ZSS7 791 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 TMTC2Q8N394 836 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-210ENST00000566290 ZSCAN16Q9H4T2 348 aaPredicted RBP19.65■□□□□ 0.74
RAB40C-210ENST00000566290 GGA3Q9NZ52 723 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 ELP1O95163 1332 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 NEDD4P46934 1319 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 MYO3BQ8WXR4 1341 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 ROBO3Q96MS0 1386 aa19.65■□□□□ 0.74
RAB40C-210ENST00000566290 F8W031 263 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-210ENST00000566290 TBC1D8O95759 1140 aa19.64■□□□□ 0.73
RAB40C-210ENST00000566290 FXR1P51114 621 aaKnown RBP eCLIP19.64■□□□□ 0.73
RAB40C-210ENST00000566290 PPARAQ07869 468 aa19.64■□□□□ 0.73
RAB40C-210ENST00000566290 GRIK5Q16478 980 aa19.64■□□□□ 0.73
RAB40C-210ENST00000566290 ANGEL2Q5VTE6 544 aaKnown RBP19.64■□□□□ 0.73
RAB40C-210ENST00000566290 ATL3Q6DD88 541 aa19.64■□□□□ 0.73
RAB40C-210ENST00000566290 IGDCC4Q8TDY8 1250 aa19.64■□□□□ 0.73
RAB40C-210ENST00000566290 ARPP21Q9UBL0 812 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-210ENST00000566290 DDX49Q9Y6V7 483 aaKnown RBP19.64■□□□□ 0.73
RAB40C-210ENST00000566290 MYH15Q9Y2K3 1946 aa19.64■□□□□ 0.73
RAB40C-210ENST00000566290 PTPDC1A2A3K4 754 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 CDKL5O76039 1030 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 CTDNEP1O95476 244 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 LDHBP07195 334 aaKnown RBP19.63■□□□□ 0.73
RAB40C-210ENST00000566290 PRDX5P30044 214 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 SART3Q15020 963 aaKnown RBP19.63■□□□□ 0.73
RAB40C-210ENST00000566290 PPP2R5BQ15173 497 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 RASAL3Q86YV0 1011 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 MIGA1Q8NAN2 632 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 DCPSQ96C86 337 aaKnown RBP19.63■□□□□ 0.73
RAB40C-210ENST00000566290 ZBED3Q96IU2 234 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-210ENST00000566290 LRRC2Q9BYS8 371 aa19.63■□□□□ 0.73
RAB40C-210ENST00000566290 STK36Q9NRP7 1315 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 KLF18A0A0U1RQI7 1052 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 WNT10BO00744 389 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 PRKAB2O43741 272 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 ORC4O43929 436 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 L1TD1Q5T7N2 865 aaKnown RBP19.62■□□□□ 0.73
RAB40C-210ENST00000566290 APOA5Q6Q788 366 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 CYB5R4Q7L1T6 521 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 DZIP1Q86YF9 867 aaKnown RBP19.62■□□□□ 0.73
RAB40C-210ENST00000566290 SLF2Q8IX21 1173 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 FOCADQ5VW36 1801 aa19.62■□□□□ 0.73
RAB40C-210ENST00000566290 GOLGA8BA8MQT2 603 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 ZNF445P59923 1031 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 STK3Q13188 491 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-210ENST00000566290 OGFOD1Q8N543 542 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 ESR2Q92731 530 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 LY9Q9HBG7 655 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 BRPF3Q9ULD4 1205 aa19.61■□□□□ 0.73
RAB40C-210ENST00000566290 MKI67P46013 3256 aaKnown RBP19.61■□□□□ 0.73
RAB40C-210ENST00000566290 MROH7-TTC4A0A0A0MT08 1334 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 GAKO14976 1311 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 VPS37CA5D8V6 355 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-210ENST00000566290 B4E1Z4 1266 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 JAK2O60674 1132 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 PRPF40AO75400 957 aaKnown RBP19.6■□□□□ 0.73
RAB40C-210ENST00000566290 BAG3O95817 575 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 FKBP1AP62942 108 aaKnown RBP19.6■□□□□ 0.73
RAB40C-210ENST00000566290 KRT85P78386 507 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 CHAF1AQ13111 956 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-210ENST00000566290 MFSD14BQ5SR56 506 aa19.6■□□□□ 0.73
RAB40C-210ENST00000566290 FBXO46Q6PJ61 603 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-210ENST00000566290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.6■□□□□ 0.734e-6■■■□□ 15.8
RAB40C-210ENST00000566290 PLCG2P16885 1265 aa19.59■□□□□ 0.73
RAB40C-210ENST00000566290 CPLX2Q6PUV4 134 aaKnown RBP19.59■□□□□ 0.73
RAB40C-210ENST00000566290 CDCA5Q96FF9 252 aa19.59■□□□□ 0.73
RAB40C-210ENST00000566290 SCAND2PQ9GZW5 306 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-210ENST00000566290 DCP1AQ9NPI6 582 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-210ENST00000566290 ZSWIM5Q9P217 1185 aa19.59■□□□□ 0.73
RAB40C-210ENST00000566290 KDM4AO75164 1064 aa19.58■□□□□ 0.72
RAB40C-210ENST00000566290 SLC3A2P08195 630 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms