RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 SPDYE6P0CI01 402 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 CYP2D6P10635 497 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 PRELPP51888 382 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 PICALMQ13492 652 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 ME3Q16798 604 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 CHST3Q7LGC8 479 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 RNF214Q8ND24 703 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 CHAMP1Q96JM3 812 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 OSBPL5Q9H0X9 879 aaPredicted RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 INCENPQ9NQS7 918 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 ANGEL1Q9UNK9 670 aaKnown RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 TACC3Q9Y6A5 838 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 MYO1BO43795 1136 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 ENTPD3O75355 529 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 LIFRP42702 1097 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZNF280AP59817 542 aaPredicted RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 TMEM67Q5HYA8 995 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 STK11IPQ8N1F8 1099 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 IGDCC4Q8TDY8 1250 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 PRMT6Q96LA8 375 aaPredicted RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 LARP6Q9BRS8 491 aaKnown RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 UBAC1Q9BSL1 405 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 MKNK2Q9HBH9 465 aa10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 DDX4Q9NQI0 724 aaKnown RBP10.98□□□□□ -0.65
CNEP1R1-206ENST00000565556 SH2B2O14492 632 aaPredicted RBP10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 PFKFB2O60825 505 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 PLCD1P51178 756 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 APOBRQ0VD83 1088 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 CCDC178Q5BJE1 867 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 CCDC183Q5T5S1 534 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 C16orf86Q6ZW13 317 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 SGMS1Q86VZ5 419 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 ZNF444Q8N0Y2 327 aaPredicted RBP10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 TDRD3Q9H7E2 651 aaKnown RBP10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 FAM13BQ9NYF5 915 aa10.97□□□□□ -0.65
CNEP1R1-206ENST00000565556 COL2A1P02458 1487 aaPredicted RBP10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 SOCS7O14512 581 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 LARGE1O95461 756 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 RBM10P98175 930 aaKnown RBP10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 GPC2Q8N158 579 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 EHD4Q9H223 541 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 MYOZ2Q9NPC6 264 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
CNEP1R1-206ENST00000565556 KLF18A0A0U1RQI7 1052 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 CCDC69A6NI79 296 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 TSPY2A6NKD2 308 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 SMIM22K7EJ46 135 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 PRDM1O75626 825 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 PDIA3P30101 505 aaKnown RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 CDK8P49336 464 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 NFIAQ12857 509 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 WTAPQ15007 396 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 SLC4A8Q2Y0W8 1093 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 USP48Q86UV5 1035 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 CCDC83Q8IWF9 413 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 GTF3C6Q969F1 213 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 DYNLL2Q96FJ2 89 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 LLPHQ9BRT6 129 aaKnown RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 LY9Q9HBG7 655 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 PI4KBQ9UBF8 816 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZNF70Q9UC06 446 aaPredicted RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 FAM198AQ9UFP1 575 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 SERPINB13Q9UIV8 391 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 H7C1D1 291 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 GRIN3BO60391 1043 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 RCAN1P53805 252 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 GABPAQ06546 454 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 STK3Q13188 491 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 GPR162Q16538 588 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 FOXP4Q8IVH2 680 aaPredicted RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 NECAB1Q8N987 351 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 TCP11L1Q9NUJ3 509 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 RNF181Q9P0P0 153 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 CNOT7Q9UIV1 285 aaKnown RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 SMC3Q9UQE7 1217 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 ATP6V1DQ9Y5K8 247 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 MYH8P13535 1937 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 TCHHQ07283 1943 aa10.95□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZNF541Q9H0D2 1346 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms