RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TNPO2O14787 897 aaKnown RBP28.91■■■□□ 2.22
RAB40C-209ENST00000565511 ASNSP08243 561 aa28.91■■■□□ 2.22
RAB40C-209ENST00000565511 MAP3K12Q12852 859 aa28.91■■■□□ 2.22
RAB40C-209ENST00000565511 FAM110CQ1W6H9 321 aa28.91■■■□□ 2.22
RAB40C-209ENST00000565511 KIF1BPQ96EK5 621 aa28.91■■■□□ 2.22
RAB40C-209ENST00000565511 AS3MTQ9HBK9 375 aa28.91■■■□□ 2.22
RAB40C-209ENST00000565511 PNMA3Q9UL41 463 aa28.91■■■□□ 2.22
RAB40C-209ENST00000565511 PDE6AP16499 860 aa28.9■■■□□ 2.22
RAB40C-209ENST00000565511 USP5P45974 858 aa28.9■■■□□ 2.22
RAB40C-209ENST00000565511 BACE1P56817 501 aa28.9■■■□□ 2.22
RAB40C-209ENST00000565511 ADCY3O60266 1144 aa28.89■■■□□ 2.22
RAB40C-209ENST00000565511 HLA-DOAP06340 250 aa28.89■■■□□ 2.22
RAB40C-209ENST00000565511 SLFNL1Q499Z3 407 aa28.89■■■□□ 2.22
RAB40C-209ENST00000565511 SLAIN1Q8ND83 568 aa28.89■■■□□ 2.22
RAB40C-209ENST00000565511 DNAJC2Q99543 621 aaKnown RBP28.89■■■□□ 2.22
RAB40C-209ENST00000565511 TRIM34Q9BYJ4 488 aa28.89■■■□□ 2.22
RAB40C-209ENST00000565511 UNC93B1Q9H1C4 597 aa28.89■■■□□ 2.22
RAB40C-209ENST00000565511 GOLIM4O00461 696 aa28.88■■■□□ 2.21
RAB40C-209ENST00000565511 CLASRPQ8N2M8 674 aaKnown RBP28.88■■■□□ 2.21
RAB40C-209ENST00000565511 BIN2Q9UBW5 565 aaPredicted RBP28.88■■■□□ 2.21
RAB40C-209ENST00000565511 TCRBV5S4A2TA0A5A2 114 aa28.87■■■□□ 2.21
RAB40C-209ENST00000565511 HMMRO75330 724 aa28.87■■■□□ 2.21
RAB40C-209ENST00000565511 GH2P01242 217 aa28.87■■■□□ 2.21
RAB40C-209ENST00000565511 INHAP05111 366 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 PLCD1P51178 756 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 TATDN1Q6P1N9 297 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 POTEEQ6S8J3 1075 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.86■■■□□ 2.21
RAB40C-209ENST00000565511 P2RX7Q99572 595 aaKnown RBP28.86■■■□□ 2.21
RAB40C-209ENST00000565511 RNF208Q9H0X6 261 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 TXNRD2Q9NNW7 524 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 EMILIN3Q9NT22 766 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 ZNF532Q9HCE3 1301 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 MYH7P12883 1935 aa28.86■■■□□ 2.21
RAB40C-209ENST00000565511 CHGBP05060 677 aa28.85■■■□□ 2.21
RAB40C-209ENST00000565511 GJB1P08034 283 aa28.85■■■□□ 2.21
RAB40C-209ENST00000565511 IFIT2P09913 472 aaKnown RBP28.85■■■□□ 2.21
RAB40C-209ENST00000565511 GCLCP48506 637 aaPredicted RBP28.85■■■□□ 2.21
RAB40C-209ENST00000565511 IRF5Q13568 498 aa28.85■■■□□ 2.21
RAB40C-209ENST00000565511 SLC9C2Q5TAH2 1124 aa28.85■■■□□ 2.21
RAB40C-209ENST00000565511 EHD4Q9H223 541 aa28.85■■■□□ 2.21
RAB40C-209ENST00000565511 MAGEB6P1A0A0J9YX57 407 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 USP17L10C9JJH3 530 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 HOXA7P31268 230 aaPredicted RBP28.84■■■□□ 2.21
RAB40C-209ENST00000565511 SHMT1P34896 483 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 GJA8P48165 433 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 PABPC4Q13310 644 aaKnown RBP eCLIP28.84■■■□□ 2.21
RAB40C-209ENST00000565511 UBE2Q1Q7Z7E8 422 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 LCORLQ8N3X6 602 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 GINM1Q9NU53 330 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 TMOD4Q9NZQ9 345 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 MORF4L1Q9UBU8 362 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 SERPINB13Q9UIV8 391 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 TAOK2Q9UL54 1235 aa28.84■■■□□ 2.21
RAB40C-209ENST00000565511 BAZ2AQ9UIF9 1905 aaKnown RBP28.84■■■□□ 2.21
RAB40C-209ENST00000565511 RAB11FIP3O75154 756 aa28.83■■■□□ 2.21
RAB40C-209ENST00000565511 UBXN2AP68543 259 aa28.83■■■□□ 2.21
RAB40C-209ENST00000565511 TTF1Q15361 905 aaPredicted RBP28.83■■■□□ 2.21
RAB40C-209ENST00000565511 CERS3Q8IU89 383 aa28.83■■■□□ 2.21
RAB40C-209ENST00000565511 IRX3P78415 501 aaPredicted RBP28.82■■■□□ 2.2
RAB40C-209ENST00000565511 PXYLP1Q8TE99 480 aa28.82■■■□□ 2.2
RAB40C-209ENST00000565511 COA7Q96BR5 231 aa28.82■■■□□ 2.2
RAB40C-209ENST00000565511 BOLA2Q9H3K6 86 aa28.82■■■□□ 2.2
RAB40C-209ENST00000565511 GJD2Q9UKL4 321 aa28.82■■■□□ 2.2
RAB40C-209ENST00000565511 C19orf81C9J6K1 198 aa28.81■■■□□ 2.2
RAB40C-209ENST00000565511 SMARCA5O60264 1052 aaPredicted RBP28.81■■■□□ 2.2
RAB40C-209ENST00000565511 CYP2D6P10635 497 aa28.81■■■□□ 2.2
RAB40C-209ENST00000565511 GUCY1A2P33402 732 aa28.81■■■□□ 2.2
RAB40C-209ENST00000565511 HERVK_113P62684 666 aa28.81■■■□□ 2.2
RAB40C-209ENST00000565511 ZYXQ15942 572 aaKnown RBP28.81■■■□□ 2.2
RAB40C-209ENST00000565511 TMED8Q6PL24 325 aaPredicted RBP28.81■■■□□ 2.2
RAB40C-209ENST00000565511 ACER1Q8TDN7 264 aa28.81■■■□□ 2.2
RAB40C-209ENST00000565511 U2AF1L4Q8WU68 220 aaKnown RBP28.81■■■□□ 2.2
RAB40C-209ENST00000565511 SDR42E1Q8WUS8 393 aa28.81■■■□□ 2.2
RAB40C-209ENST00000565511 GABPAQ06546 454 aa28.8■■■□□ 2.2
RAB40C-209ENST00000565511 PAG1Q9NWQ8 432 aa28.8■■■□□ 2.2
RAB40C-209ENST00000565511 TRIM32Q13049 653 aa28.79■■■□□ 2.2
RAB40C-209ENST00000565511 TTC6Q86TZ1 520 aa28.79■■■□□ 2.2
RAB40C-209ENST00000565511 ARMT1Q9H993 441 aa28.79■■■□□ 2.2
RAB40C-209ENST00000565511 RBPJLQ9UBG7 517 aa28.79■■■□□ 2.2
RAB40C-209ENST00000565511 MYH8P13535 1937 aa28.79■■■□□ 2.2
RAB40C-209ENST00000565511 SMIM22K7EJ46 135 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 PRKAB2O43741 272 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 ATP5JP18859 108 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 PDE3AQ14432 1141 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 RAB3GAP1Q15042 981 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 Q3C1V9 767 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 CERKLQ49MI3 558 aaPredicted RBP28.78■■■□□ 2.2
RAB40C-209ENST00000565511 USP17L2Q6R6M4 530 aa28.78■■■□□ 2.2
RAB40C-209ENST00000565511 CRNKL1Q9BZJ0 848 aaKnown RBP28.78■■■□□ 2.2
RAB40C-209ENST00000565511 ALPK3Q96L96 1907 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 ADD2P35612 726 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 ABCB5Q2M3G0 1257 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 SLC44A5Q8NCS7 719 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 NKX2-3Q8TAU0 364 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 C12orf42Q96LP6 360 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 HAUS7Q99871 368 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 DCP1AQ9NPI6 582 aaPredicted RBP28.77■■■□□ 2.2
RAB40C-209ENST00000565511 MCM9Q9NXL9 1143 aa28.77■■■□□ 2.2
RAB40C-209ENST00000565511 H0YGN5 161 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms