RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	TMEM87B	Q96K49	555 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	MKNK2	Q9HBH9	465 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	PDRG1	Q9NUG6	133 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	ZSWIM5	Q9P217	1185 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	PAPPA2	Q9BXP8	1791 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	SH2B2	O14492	632 aa	Predicted RBP	11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	RANBP6	O60518	1105 aa	Known RBP	11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	CD2BP2	O95400	341 aa	Known RBP	11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	NOV	P48745	357 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	MCM2	P49736	904 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	ANKRD1	Q15327	319 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	RRP12	Q5JTH9	1297 aa	Known RBP	11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	SULF1	Q8IWU6	871 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	STK11IP	Q8N1F8	1099 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	NEDD1	Q8NHV4	660 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	CCDC17	Q96LX7	622 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	TOMM22	Q9NS69	142 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	TCP11L1	Q9NUJ3	509 aa		11.6	□□□□□ -0.55
SIN3A-205	ENST00000564778	IGKV6D-41	A0A0C4DH26	115 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	TSPY2	A6NKD2	308 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	LIFR	P42702	1097 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	AK2	P54819	239 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	EVC	P57679	992 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	TOB2	Q14106	344 aa	Predicted RBP	11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	SART3	Q15020	963 aa	Known RBP	11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	SEC23A	Q15436	765 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	CCDC178	Q5BJE1	867 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	DCAF15	Q66K64	600 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778		Q6ZUG5	572 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	KRT26	Q7Z3Y9	468 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	SGMS1	Q86VZ5	419 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	IQCA1	Q86XH1	822 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	IGDCC4	Q8TDY8	1250 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	TCEANC2	Q96MN5	208 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	TRIM34	Q9BYJ4	488 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	ANGEL1	Q9UNK9	670 aa	Known RBP	11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	SCAF8	Q9UPN6	1271 aa	Known RBP	11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	CLEC11A	Q9Y240	323 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	TNKS	O95271	1327 aa		11.59	□□□□□ -0.55
SIN3A-205	ENST00000564778	NID2	Q14112	1375 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	FAM196B	A6NMK8	535 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	PHF20L1	A8MW92	1017 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	ADM5	C9JUS6	153 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	POTEI	P0CG38	1075 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	POTEJ	P0CG39	1038 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	TSPY3	P0CV98	308 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	TSPY8	P0CW00	308 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	SLURP2	P0DP57	97 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	AKR1B1	P15121	316 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	TFAP4	Q01664	338 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	SUPT20HL1	Q3ZLR7	823 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	CERKL	Q49MI3	558 aa	Predicted RBP	11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	FAM47A	Q5JRC9	791 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	CDC37L1	Q7L3B6	337 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	CHST3	Q7LGC8	479 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	ENAH	Q8N8S7	591 aa	Predicted RBP	11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	ANKS1A	Q92625	1134 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	UBAC1	Q9BSL1	405 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	LRRC2	Q9BYS8	371 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	LY9	Q9HBG7	655 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	GINM1	Q9NU53	330 aa		11.58	□□□□□ -0.56
SIN3A-205	ENST00000564778	DOCK1	Q14185	1865 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	IFIT3	O14879	490 aa	Known RBP	11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	RCAN1	P53805	252 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	RRP1B	Q14684	758 aa	Known RBP	11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	TMEM67	Q5HYA8	995 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	PPP4R3B	Q5MIZ7	849 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	RCSD1	Q6JBY9	416 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	TMEM179	Q6ZVK1	233 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	DGKH	Q86XP1	1220 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	HSCB	Q8IWL3	235 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	BRF1	Q92994	677 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	CDCA5	Q96FF9	252 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZNF341	Q9BYN7	854 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	TBC1D2	Q9BYX2	928 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	IL17RB	Q9NRM6	502 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZNF112	Q9UJU3	913 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	ATAD5	Q96QE3	1844 aa		11.57	□□□□□ -0.56
SIN3A-205	ENST00000564778	OTOF	Q9HC10	1997 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	ERICH2	A1L162	156 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778		K7ELQ4	463 aa	Predicted RBP	11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	NMT2	O60551	498 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	FGD1	P98174	961 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	BECN1	Q14457	450 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	WTAP	Q15007	396 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	ABCB5	Q2M3G0	1257 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	MIGA2	Q7L4E1	593 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	TMTC2	Q8N394	836 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	GPHN	Q9NQX3	736 aa	Predicted RBP	11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	ZBTB21	Q9ULJ3	1066 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	LIMCH1	Q9UPQ0	1083 aa		11.56	□□□□□ -0.56
SIN3A-205	ENST00000564778	CTNND1	O60716	968 aa	Known RBP	11.55	□□□□□ -0.56
SIN3A-205	ENST00000564778	GDF11	O95390	407 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms