RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 IRX3P78415 501 aaPredicted RBP13.2□□□□□ -0.3
CFDP1-203ENST00000564286 TFCP2Q12800 502 aa13.2□□□□□ -0.3
CFDP1-203ENST00000564286 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
CFDP1-203ENST00000564286 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
CFDP1-203ENST00000564286 ASCC2Q9H1I8 757 aaPredicted RBP13.2□□□□□ -0.3
CFDP1-203ENST00000564286 TMOD4Q9NZQ9 345 aa13.2□□□□□ -0.3
CFDP1-203ENST00000564286 RAI14Q9P0K7 980 aa13.2□□□□□ -0.3
CFDP1-203ENST00000564286 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
CFDP1-203ENST00000564286 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 GNAI3P08754 354 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
CFDP1-203ENST00000564286 RHBDL3P58872 404 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
CFDP1-203ENST00000564286 TRIM34Q9BYJ4 488 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 LRP2BPQ9P2M1 347 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
CFDP1-203ENST00000564286 CEP290O15078 2479 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
CFDP1-203ENST00000564286 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 TEX11Q8IYF3 940 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 TRMT44Q8IYL2 757 aaKnown RBP13.18□□□□□ -0.3
CFDP1-203ENST00000564286 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
CFDP1-203ENST00000564286 GDF15Q99988 308 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
CFDP1-203ENST00000564286 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
CFDP1-203ENST00000564286 ZMYND8Q9ULU4 1186 aaPredicted RBP13.18□□□□□ -0.3
CFDP1-203ENST00000564286 BAG3O95817 575 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 SOCS4Q8WXH5 440 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 MEIS3Q99687 375 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
CFDP1-203ENST00000564286 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 DOCK2Q92608 1830 aa13.17□□□□□ -0.3
CFDP1-203ENST00000564286 SZT2Q5T011 3432 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 ASNSP08243 561 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 SYN1P17600 705 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 CYP2B6P20813 491 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 BACE1P56817 501 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
CFDP1-203ENST00000564286 MTMR2Q13614 643 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
CFDP1-203ENST00000564286 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 MGAMO43451 1857 aa13.16□□□□□ -0.3
CFDP1-203ENST00000564286 COL2A1P02458 1487 aaPredicted RBP13.16□□□□□ -0.3
CFDP1-203ENST00000564286 RANBP2P49792 3224 aaKnown RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 DOCK1Q14185 1865 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 MAPK4P31152 587 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 TRIM32Q13049 653 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 TDHQ8IZJ6 230 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 GTF3C2Q8WUA4 911 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 UBE2OQ9C0C9 1292 aaKnown RBP13.15□□□□□ -0.3
CFDP1-203ENST00000564286 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
CFDP1-203ENST00000564286 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-203ENST00000564286 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-203ENST00000564286 HERVK_113P62684 666 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 MTX1Q13505 466 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 PI16Q6UXB8 463 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-203ENST00000564286 TRIB2Q92519 343 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 P2RX7Q99572 595 aaKnown RBP13.14□□□□□ -0.31
CFDP1-203ENST00000564286 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
CFDP1-203ENST00000564286 RGS2P41220 211 aa13.13□□□□□ -0.31
CFDP1-203ENST00000564286 RRP1BQ14684 758 aaKnown RBP13.13□□□□□ -0.31
CFDP1-203ENST00000564286 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
CFDP1-203ENST00000564286 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
CFDP1-203ENST00000564286 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
CFDP1-203ENST00000564286 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
CFDP1-203ENST00000564286 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
CFDP1-203ENST00000564286 GNAI2P04899 355 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 MCAMP43121 646 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 MAP3K21Q5TCX8 1036 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 MAPKAPK5Q8IW41 473 aa13.12□□□□□ -0.31
CFDP1-203ENST00000564286 PAGR1Q9BTK6 254 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms