RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 C12orf60Q5U649 245 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 TNS4Q8IZW8 715 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 ZNF280CQ8ND82 737 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 DDRGK1Q96HY6 314 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 SEC62Q99442 399 aaKnown RBP24.36■■□□□ 1.49
CMTM3-206ENST00000563672 TRIM75PA6NK02 468 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 GNAT2P19087 354 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 PDE4AP27815 886 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 SPP2Q13103 211 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 TAF1CQ15572 869 aaPredicted RBP24.35■■□□□ 1.49
CMTM3-206ENST00000563672 GPAT2Q6NUI2 795 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 GIMAP6Q6P9H5 292 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 FASTKD5Q7L8L6 764 aaKnown RBP24.35■■□□□ 1.49
CMTM3-206ENST00000563672 WDR18Q9BV38 432 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 ZBTB21Q9ULJ3 1066 aa24.35■■□□□ 1.49
CMTM3-206ENST00000563672 CASP8AP2Q9UKL3 1982 aa24.34■■□□□ 1.49
CMTM3-206ENST00000563672 NAV1Q8NEY1 1877 aa24.34■■□□□ 1.49
CMTM3-206ENST00000563672 CERKLQ49MI3 558 aaPredicted RBP24.34■■□□□ 1.49
CMTM3-206ENST00000563672 CTR9Q6PD62 1173 aa24.34■■□□□ 1.49
CMTM3-206ENST00000563672 ZFYVE28Q9HCC9 887 aa24.34■■□□□ 1.49
CMTM3-206ENST00000563672 CYP2D7A0A087X1C5 515 aa24.33■■□□□ 1.49
CMTM3-206ENST00000563672 FKTNO75072 461 aa24.33■■□□□ 1.49
CMTM3-206ENST00000563672 AS3MTQ9HBK9 375 aa24.33■■□□□ 1.49
CMTM3-206ENST00000563672 SWAP70Q9UH65 585 aa24.33■■□□□ 1.49
CMTM3-206ENST00000563672 PHIPQ8WWQ0 1821 aa24.33■■□□□ 1.48
CMTM3-206ENST00000563672 TRIM6-TRIM34B2RNG4 842 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 PATL2C9JE40 543 aaKnown RBP24.32■■□□□ 1.48
CMTM3-206ENST00000563672 SMIM22K7EJ46 135 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 PDHXO00330 501 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 GH2P01242 217 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 SBK1Q52WX2 424 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 AMOTL1Q8IY63 956 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 DYNLL2Q96FJ2 89 aa24.32■■□□□ 1.48
CMTM3-206ENST00000563672 EPB41L4AQ9HCS5 686 aaPredicted RBP24.32■■□□□ 1.48
CMTM3-206ENST00000563672 ABCB5Q2M3G0 1257 aa24.31■■□□□ 1.48
CMTM3-206ENST00000563672 SH3D19Q5HYK7 790 aa24.31■■□□□ 1.48
CMTM3-206ENST00000563672 GADL1Q6ZQY3 521 aa24.31■■□□□ 1.48
CMTM3-206ENST00000563672 SLC44A5Q8NCS7 719 aa24.31■■□□□ 1.48
CMTM3-206ENST00000563672 ARPP21Q9UBL0 812 aaPredicted RBP24.31■■□□□ 1.48
CMTM3-206ENST00000563672 TLR2O60603 784 aa24.3■■□□□ 1.48
CMTM3-206ENST00000563672 RILPL2Q969X0 211 aa24.3■■□□□ 1.48
CMTM3-206ENST00000563672 HELLSQ9NRZ9 838 aa24.3■■□□□ 1.48
CMTM3-206ENST00000563672 SLC45A1Q9Y2W3 748 aa24.3■■□□□ 1.48
CMTM3-206ENST00000563672 BACE1P56817 501 aa24.29■■□□□ 1.48
CMTM3-206ENST00000563672 C16orf86Q6ZW13 317 aa24.29■■□□□ 1.48
CMTM3-206ENST00000563672 IFNL3Q8IZI9 196 aa24.29■■□□□ 1.48
CMTM3-206ENST00000563672 PROCA1Q8NCQ7 364 aaPredicted RBP24.29■■□□□ 1.48
CMTM3-206ENST00000563672 CABP5Q9NP86 173 aa24.29■■□□□ 1.48
CMTM3-206ENST00000563672 ATAD5Q96QE3 1844 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 APPP05067 770 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 GUCY1A2P33402 732 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 CDK8P49336 464 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 HMGCS2P54868 508 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 CCDC129Q6ZRS4 1044 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 CTU1Q7Z7A3 348 aaKnown RBP24.28■■□□□ 1.48
CMTM3-206ENST00000563672 FAM227BQ96M60 508 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 AGTPBP1Q9UPW5 1226 aa24.28■■□□□ 1.48
CMTM3-206ENST00000563672 BAZ2AQ9UIF9 1905 aaKnown RBP24.27■■□□□ 1.48
CMTM3-206ENST00000563672 C19orf81C9J6K1 198 aa24.27■■□□□ 1.48
CMTM3-206ENST00000563672 USP17L10C9JJH3 530 aa24.27■■□□□ 1.48
CMTM3-206ENST00000563672 SP3Q02447 781 aa24.27■■□□□ 1.48
CMTM3-206ENST00000563672 MTMR2Q13614 643 aa24.27■■□□□ 1.48
CMTM3-206ENST00000563672 ADGRA2Q96PE1 1338 aa24.27■■□□□ 1.48
CMTM3-206ENST00000563672 A0A0D9SFI3 127 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 FOXP2O15409 715 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 SDSP20132 328 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 TDO2P48775 406 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 DGKZQ13574 1117 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 RAB3GAP1Q15042 981 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 MCMDC2Q4G0Z9 681 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 TREML2Q5T2D2 321 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 C17orf99Q6UX52 265 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 PARK7Q99497 189 aaKnown RBP24.26■■□□□ 1.47
CMTM3-206ENST00000563672 NACAP1Q9BZK3 213 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 MCOLN1Q9GZU1 580 aa24.26■■□□□ 1.47
CMTM3-206ENST00000563672 PTPRFP10586 1907 aa24.25■■□□□ 1.47
CMTM3-206ENST00000563672 CYP2C8P10632 490 aa24.25■■□□□ 1.47
CMTM3-206ENST00000563672 NMIQ13287 307 aaPredicted RBP24.25■■□□□ 1.47
CMTM3-206ENST00000563672 SEPT2Q15019 361 aa24.25■■□□□ 1.47
CMTM3-206ENST00000563672 CCDC17Q96LX7 622 aa24.25■■□□□ 1.47
CMTM3-206ENST00000563672 MINDY4BA8MYZ0 360 aa24.24■■□□□ 1.47
CMTM3-206ENST00000563672 AKR1B1P15121 316 aa24.24■■□□□ 1.47
CMTM3-206ENST00000563672 TTC22Q5TAA0 569 aa24.24■■□□□ 1.47
CMTM3-206ENST00000563672 TMEM179Q6ZVK1 233 aa24.24■■□□□ 1.47
CMTM3-206ENST00000563672 ERO1AQ96HE7 468 aa24.24■■□□□ 1.47
CMTM3-206ENST00000563672 ROBO3Q96MS0 1386 aa24.24■■□□□ 1.47
CMTM3-206ENST00000563672 MPHOSPH10O00566 681 aaKnown RBP24.23■■□□□ 1.47
CMTM3-206ENST00000563672 GSPT1P15170 499 aaKnown RBP24.23■■□□□ 1.47
CMTM3-206ENST00000563672 VPS53Q5VIR6 699 aa24.23■■□□□ 1.47
CMTM3-206ENST00000563672 CD99L2Q8TCZ2 262 aa24.23■■□□□ 1.47
CMTM3-206ENST00000563672 ACER1Q8TDN7 264 aa24.23■■□□□ 1.47
CMTM3-206ENST00000563672 EMILIN3Q9NT22 766 aa24.23■■□□□ 1.47
CMTM3-206ENST00000563672 TMOD4Q9NZQ9 345 aa24.23■■□□□ 1.47
CMTM3-206ENST00000563672 CAP1Q01518 475 aa24.22■■□□□ 1.47
CMTM3-206ENST00000563672 USP17L2Q6R6M4 530 aa24.22■■□□□ 1.47
CMTM3-206ENST00000563672 CENPQQ7L2Z9 268 aaPredicted RBP24.22■■□□□ 1.47
CMTM3-206ENST00000563672 KIAA1683Q9H0B3 1180 aa24.22■■□□□ 1.47
CMTM3-206ENST00000563672 NAPBQ9H115 298 aa24.22■■□□□ 1.47
CMTM3-206ENST00000563672 CPA4Q9UI42 421 aa24.22■■□□□ 1.47
CMTM3-206ENST00000563672 HOXA7P31268 230 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 667.2 ms