RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 DUSP9Q99956 384 aaKnown RBP5.09□□□□□ -1.59
LINC01416-201ENST00000563553 PRDM5Q9NQX1 630 aaPredicted RBP5.09□□□□□ -1.59
LINC01416-201ENST00000563553 ZNF503-AS2A6NEH8 195 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 CLCN7P51798 805 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 AGMOQ6ZNB7 445 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 ZNF507Q8TCN5 953 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 ASB11Q8WXH4 323 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 AK5Q9Y6K8 562 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 CAPN6Q9Y6Q1 641 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 CTSHP09668 335 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 RPS26P62854 115 aaKnown RBP5.08□□□□□ -1.6
LINC01416-201ENST00000563553 ZP2Q05996 745 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 PRAMEF13Q5VWM6 474 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 FYB2Q5VWT5 728 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 DNAJC14Q6Y2X3 702 aaPredicted RBP5.08□□□□□ -1.6
LINC01416-201ENST00000563553 ARHGAP27Q6ZUM4 889 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 KCT2Q8NC54 265 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 HSPA12BQ96MM6 686 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 FOXQ1Q9C009 403 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 ATP13A1Q9HD20 1204 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 PICK1Q9NRD5 415 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 CTNND2Q9UQB3 1225 aa5.08□□□□□ -1.6
LINC01416-201ENST00000563553 TFE3P19532 575 aaPredicted RBP5.07□□□□□ -1.6
LINC01416-201ENST00000563553 EIF4BP23588 611 aaKnown RBP5.07□□□□□ -1.6
LINC01416-201ENST00000563553 GRK4P32298 578 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 MESP2Q0VG99 397 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 IKZF1Q13422 519 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 CCDC85BQ15834 202 aaPredicted RBP5.07□□□□□ -1.6
LINC01416-201ENST00000563553 HDXQ7Z353 690 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 NPAS4Q8IUM7 802 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 FRMD6Q96NE9 622 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 MIPEPQ99797 713 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 SNCAIPQ9Y6H5 919 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 RB1CC1Q8TDY2 1594 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 ANKRD33BA6NCL7 494 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 BIN1O00499 593 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 ZNF124Q15973 351 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 CDC37L1Q7L3B6 337 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 CILP2Q8IUL8 1156 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 TJP2Q9UDY2 1190 aa5.07□□□□□ -1.6
LINC01416-201ENST00000563553 CST3P01034 146 aaPredicted RBP5.06□□□□□ -1.6
LINC01416-201ENST00000563553 LIG3P49916 1009 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 LETMD1Q6P1Q0 360 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 DPH2Q9BQC3 489 aaPredicted RBP5.06□□□□□ -1.6
LINC01416-201ENST00000563553 FGD1P98174 961 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 SND1Q7KZF4 910 aaKnown RBP eCLIP5.06□□□□□ -1.6
LINC01416-201ENST00000563553 HID1Q8IV36 788 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 MFSD4AQ8N468 514 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 TMEM40Q8WWA1 233 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 TLR6Q9Y2C9 796 aa5.06□□□□□ -1.6
LINC01416-201ENST00000563553 GNAT3A8MTJ3 354 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 ETF1P62495 437 aaKnown RBP5.05□□□□□ -1.6
LINC01416-201ENST00000563553 MAP3K11Q16584 847 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 FBXO33Q7Z6M2 555 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 MRPL41Q8IXM3 137 aaKnown RBP5.05□□□□□ -1.6
LINC01416-201ENST00000563553 MFSD2AQ8NA29 543 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 XAGE3Q8WTP9 111 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 CARS2Q9HA77 564 aaKnown RBP5.05□□□□□ -1.6
LINC01416-201ENST00000563553 ZSWIM9Q86XI8 627 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 Q96M66 194 aa5.05□□□□□ -1.6
LINC01416-201ENST00000563553 H3BS24 57 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 TAGLNQ01995 201 aaKnown RBP5.04□□□□□ -1.6
LINC01416-201ENST00000563553 TNK2Q07912 1038 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 SFRP5Q5T4F7 317 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 CDKAL1Q5VV42 579 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 DNAJB8Q8NHS0 232 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 ACSF2Q96CM8 615 aaPredicted RBP5.04□□□□□ -1.6
LINC01416-201ENST00000563553 FAM161BQ96MY7 647 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 LMCD1Q9NZU5 365 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 PARP2Q9UGN5 583 aa5.04□□□□□ -1.6
LINC01416-201ENST00000563553 WASH4PA8MWX3 477 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 DAB2P98082 770 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 PHC3Q8NDX5 983 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 PPP1R13LQ8WUF5 828 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 TPX2Q9ULW0 747 aaKnown RBP5.03□□□□□ -1.6
LINC01416-201ENST00000563553 TACC3Q9Y6A5 838 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 LIN37Q96GY3 246 aaPredicted RBP5.03□□□□□ -1.6
LINC01416-201ENST00000563553 TMEM87BQ96K49 555 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 CORINQ9Y5Q5 1042 aa5.03□□□□□ -1.6
LINC01416-201ENST00000563553 EAPPQ56P03 285 aaPredicted RBP5.02□□□□□ -1.61
LINC01416-201ENST00000563553 CDH24Q86UP0 819 aa5.02□□□□□ -1.61
LINC01416-201ENST00000563553 FAM221AA4D161 298 aa5.02□□□□□ -1.61
LINC01416-201ENST00000563553 F6X3S4 739 aa5.02□□□□□ -1.61
LINC01416-201ENST00000563553 ESR1P03372 595 aa5.02□□□□□ -1.61
LINC01416-201ENST00000563553 KRT1P04264 644 aa5.02□□□□□ -1.61
LINC01416-201ENST00000563553 SPOCD1Q6ZMY3 1216 aa5.02□□□□□ -1.61
LINC01416-201ENST00000563553 MCATQ8IVS2 390 aaKnown RBP5.02□□□□□ -1.61
LINC01416-201ENST00000563553 USP31Q70CQ4 1352 aa5.01□□□□□ -1.61
LINC01416-201ENST00000563553 FAM155AB1AL88 458 aaPredicted RBP5.01□□□□□ -1.61
LINC01416-201ENST00000563553 FARP2O94887 1054 aaPredicted RBP5.01□□□□□ -1.61
LINC01416-201ENST00000563553 CBX7O95931 251 aa5.01□□□□□ -1.61
LINC01416-201ENST00000563553 PGRP06401 933 aa5.01□□□□□ -1.61
LINC01416-201ENST00000563553 ST13P50502 369 aaKnown RBP5.01□□□□□ -1.61
LINC01416-201ENST00000563553 RPL6Q02878 288 aaKnown RBP5.01□□□□□ -1.61
LINC01416-201ENST00000563553 BNC2Q6ZN30 1099 aaPredicted RBP5.01□□□□□ -1.61
LINC01416-201ENST00000563553 THAP5Q7Z6K1 395 aa5.01□□□□□ -1.61
LINC01416-201ENST00000563553 RHOVQ96L33 236 aa5.01□□□□□ -1.61
LINC01416-201ENST00000563553 NOC4LQ9BVI4 516 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms