RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ABCB5Q2M3G0 1257 aa22.3■■□□□ 1.16
RAB40C-207ENST00000563109 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.3■■□□□ 1.16
RAB40C-207ENST00000563109 TBC1D10CQ8IV04 446 aa22.3■■□□□ 1.16
RAB40C-207ENST00000563109 ZNF444Q8N0Y2 327 aaPredicted RBP22.3■■□□□ 1.16
RAB40C-207ENST00000563109 ORC4O43929 436 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 PRDM1O75626 825 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 ASNSP08243 561 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 CYP21A2P08686 494 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 HSPA6P17066 643 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 RRP12Q5JTH9 1297 aaKnown RBP22.29■■□□□ 1.16
RAB40C-207ENST00000563109 CREB3L3Q68CJ9 461 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 HHIPL1Q96JK4 782 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 NBPF3Q9H094 633 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 ELP3Q9H9T3 547 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.29■■□□□ 1.164e-6■■■□□ 15.8
RAB40C-207ENST00000563109 SNCAIPQ9Y6H5 919 aa22.29■■□□□ 1.16
RAB40C-207ENST00000563109 SLC27A2O14975 620 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 RASA1P20936 1047 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 NT5C2P49902 561 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 TRDNQ13061 729 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 NECTIN1Q15223 517 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 PAXIP1Q6ZW49 1069 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-207ENST00000563109 SLC10A4Q96EP9 437 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 CLMNQ96JQ2 1002 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 CNNM2Q9H8M5 875 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 ZBTB21Q9ULJ3 1066 aa22.28■■□□□ 1.16
RAB40C-207ENST00000563109 GH2P01242 217 aa22.27■■□□□ 1.16
RAB40C-207ENST00000563109 ZKSCAN1P17029 563 aaPredicted RBP22.27■■□□□ 1.16
RAB40C-207ENST00000563109 ZNF157P51786 506 aaPredicted RBP22.27■■□□□ 1.16
RAB40C-207ENST00000563109 RRP1BQ14684 758 aaKnown RBP22.27■■□□□ 1.16
RAB40C-207ENST00000563109 RGMBQ6NW40 437 aa22.27■■□□□ 1.16
RAB40C-207ENST00000563109 TMEM179Q6ZVK1 233 aa22.27■■□□□ 1.16
RAB40C-207ENST00000563109 GREB1LQ9C091 1923 aaPredicted RBP22.26■■□□□ 1.15
RAB40C-207ENST00000563109 TSPY2A6NKD2 308 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 RANBP6O60518 1105 aaKnown RBP22.26■■□□□ 1.15
RAB40C-207ENST00000563109 FGRP09769 529 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 TSPY3P0CV98 308 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 TSPY8P0CW00 308 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 AKR1B1P15121 316 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 RALYLQ86SE5 291 aaKnown RBP22.26■■□□□ 1.15
RAB40C-207ENST00000563109 ESR2Q92731 530 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 USP26Q9BXU7 913 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 KRT23Q9C075 422 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 NEDD4P46934 1319 aa22.26■■□□□ 1.15
RAB40C-207ENST00000563109 HSPA4P34932 840 aa22.25■■□□□ 1.15
RAB40C-207ENST00000563109 RAB3GAP1Q15042 981 aa22.25■■□□□ 1.15
RAB40C-207ENST00000563109 ERO1BQ86YB8 467 aa22.25■■□□□ 1.15
RAB40C-207ENST00000563109 TBC1D2Q9BYX2 928 aa22.25■■□□□ 1.15
RAB40C-207ENST00000563109 AS3MTQ9HBK9 375 aa22.25■■□□□ 1.15
RAB40C-207ENST00000563109 PLIN4Q96Q06 1357 aa22.25■■□□□ 1.15
RAB40C-207ENST00000563109 PHIPQ8WWQ0 1821 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 SPDYE5A6NIY4 337 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 RASSF10A6NK89 507 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 E7EWF7 191 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 PTPRAP18433 802 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 KRT32Q14532 448 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 DEFB115Q30KQ5 88 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 RASAL3Q86YV0 1011 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 CCDC102AQ96A19 550 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 OPTNQ96CV9 577 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 OTUD5Q96G74 571 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 UPF2Q9HAU5 1272 aaKnown RBP22.24■■□□□ 1.15
RAB40C-207ENST00000563109 INCENPQ9NQS7 918 aa22.24■■□□□ 1.15
RAB40C-207ENST00000563109 USP17L5A8MUK1 530 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 TFAP4Q01664 338 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 PPATQ06203 517 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 SHROOM1Q2M3G4 852 aaPredicted RBP22.23■■□□□ 1.15
RAB40C-207ENST00000563109 FAM47AQ5JRC9 791 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 NCOA7Q8NI08 942 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 WNK4Q96J92 1243 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 TACC3Q9Y6A5 838 aa22.23■■□□□ 1.15
RAB40C-207ENST00000563109 B4E1Z4 1266 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 SEC24BO95487 1268 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 SLC10A3P09131 477 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 ECE1P42892 770 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 JAG1P78504 1218 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 PPIL2Q13356 520 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 SEPT2Q15019 361 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 PPP4R3BQ5MIZ7 849 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 NEDD1Q8NHV4 660 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.22■■□□□ 1.15
RAB40C-207ENST00000563109 ZHX2Q9Y6X8 837 aa22.22■■□□□ 1.15
RAB40C-207ENST00000563109 KDM4AO75164 1064 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 ZBTB48P10074 688 aaPredicted RBP22.21■■□□□ 1.15
RAB40C-207ENST00000563109 ICA1Q05084 483 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 GRM1Q13255 1194 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 STOX1Q6ZVD7 989 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 KANSL2Q9H9L4 492 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 TAF6LQ9Y6J9 622 aa22.21■■□□□ 1.15
RAB40C-207ENST00000563109 HTRA3P83110 453 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 TSGA10IPQ3SY00 556 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 SPRYD7Q5W111 196 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 CYP4F22Q6NT55 531 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 CCDC84Q86UT8 332 aaPredicted RBP22.2■■□□□ 1.14
RAB40C-207ENST00000563109 IQCA1Q86XH1 822 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 CNKSR2Q8WXI2 1034 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 KCNB2Q92953 911 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 FEZ1Q99689 392 aa22.2■■□□□ 1.14
RAB40C-207ENST00000563109 MYH4Q9Y623 1939 aa22.19■■□□□ 1.14
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