RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 CCL5P13501 91 aa19.99■□□□□ 0.79
CDT1-202ENST00000562747 RAET1EQ8TD07 263 aa19.99■□□□□ 0.79
CDT1-202ENST00000562747 PARK7Q99497 189 aaKnown RBP19.99■□□□□ 0.79
CDT1-202ENST00000562747 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.99■□□□□ 0.79
CDT1-202ENST00000562747 STAP2Q9UGK3 403 aa19.99■□□□□ 0.79
CDT1-202ENST00000562747 CXCL11O14625 94 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 USP5P45974 858 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 UBE2Q1Q7Z7E8 422 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 SCYL3Q8IZE3 742 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 LNPKQ9C0E8 428 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 PI4KBQ9UBF8 816 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 GABRQQ9UN88 632 aa19.98■□□□□ 0.79
CDT1-202ENST00000562747 SZT2Q5T011 3432 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 A0A0G2JLL6 359 aaPredicted RBP19.97■□□□□ 0.79
CDT1-202ENST00000562747 PTPRAP18433 802 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 HOXD10P28358 340 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 NUCB1Q02818 461 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 PRRT2Q7Z6L0 340 aaPredicted RBP19.97■□□□□ 0.79
CDT1-202ENST00000562747 CHD1LQ86WJ1 897 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 CRNKL1Q9BZJ0 848 aaKnown RBP19.97■□□□□ 0.79
CDT1-202ENST00000562747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■■■■ 36.4
CDT1-202ENST00000562747 HERC5Q9UII4 1024 aaKnown RBP19.97■□□□□ 0.79
CDT1-202ENST00000562747 ZHX2Q9Y6X8 837 aa19.97■□□□□ 0.79
CDT1-202ENST00000562747 ZFYP08048 801 aaPredicted RBP19.96■□□□□ 0.79
CDT1-202ENST00000562747 GJA8P48165 433 aa19.96■□□□□ 0.79
CDT1-202ENST00000562747 PDE1AP54750 535 aa19.96■□□□□ 0.79
CDT1-202ENST00000562747 LRRFIP1Q32MZ4 808 aaKnown RBP19.96■□□□□ 0.79
CDT1-202ENST00000562747 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
CDT1-202ENST00000562747 PALD1Q9ULE6 856 aa19.96■□□□□ 0.79
CDT1-202ENST00000562747 AFG3L2Q9Y4W6 797 aa19.96■□□□□ 0.79
CDT1-202ENST00000562747 CTNND1O60716 968 aaKnown RBP19.95■□□□□ 0.78
CDT1-202ENST00000562747 HLA-DOAP06340 250 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 GJB1P08034 283 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 FCGRTP55899 365 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 GADL1Q6ZQY3 521 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 METTL16Q86W50 562 aaKnown RBP19.95■□□□□ 0.78
CDT1-202ENST00000562747 FOXP4Q8IVH2 680 aaPredicted RBP19.95■□□□□ 0.78
CDT1-202ENST00000562747 LCORLQ8N3X6 602 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 RNF208Q9H0X6 261 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 LOC285556D6RIA3 1793 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 SIPA1L1O43166 1804 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 ATAD5Q96QE3 1844 aa19.95■□□□□ 0.78
CDT1-202ENST00000562747 MYH1P12882 1939 aa19.94■□□□□ 0.78
CDT1-202ENST00000562747 SLFNL1Q499Z3 407 aa19.94■□□□□ 0.78
CDT1-202ENST00000562747 UNC93B1Q9H1C4 597 aa19.94■□□□□ 0.78
CDT1-202ENST00000562747 ARMT1Q9H993 441 aa19.94■□□□□ 0.78
CDT1-202ENST00000562747 PICK1Q9NRD5 415 aa19.94■□□□□ 0.78
CDT1-202ENST00000562747 SAP30BPQ9UHR5 308 aaKnown RBP19.94■□□□□ 0.78
CDT1-202ENST00000562747 RANBP2P49792 3224 aaKnown RBP19.94■□□□□ 0.78
CDT1-202ENST00000562747 RNF113AO15541 343 aaKnown RBP19.93■□□□□ 0.78
CDT1-202ENST00000562747 MBD4O95243 580 aa19.93■□□□□ 0.78
CDT1-202ENST00000562747 CHGBP05060 677 aa19.93■□□□□ 0.78
CDT1-202ENST00000562747 TTC6Q86TZ1 520 aa19.93■□□□□ 0.78
CDT1-202ENST00000562747 NKX2-3Q8TAU0 364 aa19.93■□□□□ 0.78
CDT1-202ENST00000562747 U2AF1L4Q8WU68 220 aaKnown RBP19.93■□□□□ 0.78
CDT1-202ENST00000562747 APPBP2Q92624 585 aa19.93■□□□□ 0.78
CDT1-202ENST00000562747 DPF3Q92784 378 aa19.93■□□□□ 0.78
CDT1-202ENST00000562747 RBM27Q9P2N5 1060 aaKnown RBP19.93■□□□□ 0.78
CDT1-202ENST00000562747 BIN2Q9UBW5 565 aaPredicted RBP19.93■□□□□ 0.78
CDT1-202ENST00000562747 DDX60LQ5H9U9 1706 aaKnown RBP19.93■□□□□ 0.78
CDT1-202ENST00000562747 NAV1Q8NEY1 1877 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 ALPK3Q96L96 1907 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 FAM196BA6NMK8 535 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 ELNP15502 786 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 FASTKD5Q7L8L6 764 aaKnown RBP19.92■□□□□ 0.78
CDT1-202ENST00000562747 CRACR2BQ8N4Y2 399 aaPredicted RBP19.92■□□□□ 0.78
CDT1-202ENST00000562747 SLAIN1Q8ND83 568 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 FSD1Q9BTV5 496 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 PUS7LQ9H0K6 701 aaKnown RBP19.92■□□□□ 0.78
CDT1-202ENST00000562747 EHD4Q9H223 541 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 ATP8A2Q9NTI2 1148 aa19.92■□□□□ 0.78
CDT1-202ENST00000562747 TRIM75PA6NK02 468 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 ADCY3O60266 1144 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 FLT3LGP49771 235 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 UBXN2AP68543 259 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 EVI5LQ96CN4 794 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 OSBPL3Q9H4L5 887 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 DCP1AQ9NPI6 582 aaPredicted RBP19.91■□□□□ 0.78
CDT1-202ENST00000562747 SLC45A1Q9Y2W3 748 aa19.91■□□□□ 0.78
CDT1-202ENST00000562747 FARP2O94887 1054 aaPredicted RBP19.9■□□□□ 0.78
CDT1-202ENST00000562747 CAP2P40123 477 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 TREML2Q5T2D2 321 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 PRO3102Q9H379 93 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 DNAJC18Q9H819 358 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 MCM9Q9NXL9 1143 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 DOCK3Q8IZD9 2030 aa19.9■□□□□ 0.78
CDT1-202ENST00000562747 INHAP05111 366 aa19.89■□□□□ 0.77
CDT1-202ENST00000562747 POLR3DP05423 398 aaPredicted RBP19.89■□□□□ 0.77
CDT1-202ENST00000562747 TICAM2Q86XR7 235 aa19.89■□□□□ 0.77
CDT1-202ENST00000562747 OSBP2Q969R2 916 aa19.89■□□□□ 0.77
CDT1-202ENST00000562747 SERPINB13Q9UIV8 391 aa19.89■□□□□ 0.77
CDT1-202ENST00000562747 TNPO2O14787 897 aaKnown RBP19.88■□□□□ 0.77
CDT1-202ENST00000562747 PRKAB2O43741 272 aa19.88■□□□□ 0.77
CDT1-202ENST00000562747 SMCR8Q8TEV9 937 aaPredicted RBP19.88■□□□□ 0.77
CDT1-202ENST00000562747 DDRGK1Q96HY6 314 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms