RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 C7orf43Q8WVR3 580 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 GTF3C6Q969F1 213 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 MASTLQ96GX5 879 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 LRRC2Q9BYS8 371 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 RAI14Q9P0K7 980 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 ABCF2Q9UG63 623 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 ANAPC4Q9UJX5 808 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 NSFL1CQ9UNZ2 370 aaKnown RBP7.72□□□□□ -1.17
CAPN3-210ENST00000561817 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-210ENST00000561817 ZNF646O15015 1829 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-210ENST00000561817 SLX4Q8IY92 1834 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 FAM205AQ6ZU69 1335 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 MAGEB6P1A0A0J9YX57 407 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 RCCD1A6NED2 376 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 SMIM22K7EJ46 135 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 DTNBO60941 627 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 CTDNEP1O95476 244 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 FGRP09769 529 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 SYT1P21579 422 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 PDIA3P30101 505 aaKnown RBP7.71□□□□□ -1.18
CAPN3-210ENST00000561817 ALDH1B1P30837 517 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 APOBRQ0VD83 1088 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 CHAF1AQ13111 956 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-210ENST00000561817 NAA16Q6N069 864 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-210ENST00000561817 GIMAP6Q6P9H5 292 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 ZNF804AQ7Z570 1209 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 NLGN2Q8NFZ4 835 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 SMARCC2Q8TAQ2 1214 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 WDR66Q8TBY9 1149 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 BRF1Q92994 677 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 ZNF274Q96GC6 653 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-210ENST00000561817 TMUB1Q9BVT8 246 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 INCENPQ9NQS7 918 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
CAPN3-210ENST00000561817 BRPF3Q9ULD4 1205 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 MTMR6Q9Y217 621 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 SLC4A4Q9Y6R1 1079 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 NEDD4P46934 1319 aa7.71□□□□□ -1.18
CAPN3-210ENST00000561817 BAZ2AQ9UIF9 1905 aaKnown RBP7.7□□□□□ -1.18
CAPN3-210ENST00000561817 SH2B2O14492 632 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-210ENST00000561817 PRC1O43663 620 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 GJB2P29033 226 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 MCM5P33992 734 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 CTDSPL2Q05D32 466 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 SCRN1Q12765 414 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 KMT5BQ4FZB7 885 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 AKNAD1Q5T1N1 836 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 SPTY2D1Q68D10 685 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-210ENST00000561817 CHST3Q7LGC8 479 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 C2CD5Q86YS7 1000 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 NCOA7Q8NI08 942 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 IGDCC4Q8TDY8 1250 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 SDR42E1Q8WUS8 393 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 CHAMP1Q96JM3 812 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 GBP4Q96PP9 640 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 RTFDC1Q9BY42 306 aaPredicted RBP7.7□□□□□ -1.18
CAPN3-210ENST00000561817 NAPBQ9H115 298 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 SERPINA10Q9UK55 444 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 SMC3Q9UQE7 1217 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 JAG2Q9Y219 1238 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 CDK5RAP2Q96SN8 1893 aa7.7□□□□□ -1.18
CAPN3-210ENST00000561817 DDX60LQ5H9U9 1706 aaKnown RBP7.69□□□□□ -1.18
CAPN3-210ENST00000561817 LAMB1P07942 1786 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 DDX11L8A8MPP1 907 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 B4E1Z4 1266 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 STX6O43752 255 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 JAK2O60674 1132 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 APPP05067 770 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 ZSCAN22P10073 491 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-210ENST00000561817 CHRNA5P30532 468 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 PPARAQ07869 468 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 SBK1Q52WX2 424 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 CTR9Q6PD62 1173 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 BLOC1S3Q6QNY0 202 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 SGMS1Q86VZ5 419 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 MPNDQ8N594 471 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 NSUN7Q8NE18 718 aaKnown RBP7.69□□□□□ -1.18
CAPN3-210ENST00000561817 LLPHQ9BRT6 129 aaKnown RBP7.69□□□□□ -1.18
CAPN3-210ENST00000561817 NACAP1Q9BZK3 213 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 COA1Q9GZY4 146 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 SENP2Q9HC62 589 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 LMBRD1Q9NUN5 540 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.69□□□□□ -1.18
CAPN3-210ENST00000561817 MYH2Q9UKX2 1941 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 GAKO14976 1311 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 WDR33Q9C0J8 1336 aaKnown RBP7.69□□□□□ -1.18
CAPN3-210ENST00000561817 NID2Q14112 1375 aa7.69□□□□□ -1.18
CAPN3-210ENST00000561817 CYP2D7A0A087X1C5 515 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 GPR75-ASB3A0A0A6YYF3 556 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 H0YIN7 160 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 C6orf229H3BNL8 230 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 NRG2O14511 850 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 OATP04181 439 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 LDHBP07195 334 aaKnown RBP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 FDPSP14324 419 aaKnown RBP7.68□□□□□ -1.18
CAPN3-210ENST00000561817 KCNA3P22001 575 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 RHBDL3P58872 404 aa7.68□□□□□ -1.18
CAPN3-210ENST00000561817 STK3Q13188 491 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms