RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 GUCY1A2P33402 732 aa16.71■□□□□ 0.27
TPM1-230ENST00000561266 INHBEP58166 350 aa16.71■□□□□ 0.27
TPM1-230ENST00000561266 CAP1Q01518 475 aa16.71■□□□□ 0.27
TPM1-230ENST00000561266 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
TPM1-230ENST00000561266 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.27
TPM1-230ENST00000561266 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
TPM1-230ENST00000561266 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
TPM1-230ENST00000561266 CRHR2Q13324 411 aa16.7■□□□□ 0.26
TPM1-230ENST00000561266 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
TPM1-230ENST00000561266 VPS53Q5VIR6 699 aa16.7■□□□□ 0.26
TPM1-230ENST00000561266 ZBTB21Q9ULJ3 1066 aa16.7■□□□□ 0.26
TPM1-230ENST00000561266 ZSWIM8A7E2V4 1837 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 A0A0G2JLL6 359 aaPredicted RBP16.69■□□□□ 0.26
TPM1-230ENST00000561266 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 GH2P01242 217 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 CETPP11597 493 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 SPP2Q13103 211 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 PRRT2Q7Z6L0 340 aaPredicted RBP16.69■□□□□ 0.26
TPM1-230ENST00000561266 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
TPM1-230ENST00000561266 STK11IPQ8N1F8 1099 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 CFHR5Q9BXR6 569 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
TPM1-230ENST00000561266 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
TPM1-230ENST00000561266 CXCL11O14625 94 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 SDSP20132 328 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 TTC22Q5TAA0 569 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 IFNL3Q8IZI9 196 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 IL25Q9H293 177 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
TPM1-230ENST00000561266 GPR25O00155 361 aa16.67■□□□□ 0.26
TPM1-230ENST00000561266 CDK8P49336 464 aa16.67■□□□□ 0.26
TPM1-230ENST00000561266 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
TPM1-230ENST00000561266 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
TPM1-230ENST00000561266 CLEC10AQ8IUN9 316 aa16.67■□□□□ 0.26
TPM1-230ENST00000561266 ZNF280CQ8ND82 737 aa16.67■□□□□ 0.26
TPM1-230ENST00000561266 ZNF296Q8WUU4 475 aaPredicted RBP16.67■□□□□ 0.26
TPM1-230ENST00000561266 ASNSP08243 561 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 AKR1B1P15121 316 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
TPM1-230ENST00000561266 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 GADL1Q6ZQY3 521 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 ACER1Q8TDN7 264 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 WDR18Q9BV38 432 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 HELLSQ9NRZ9 838 aa16.66■□□□□ 0.26
TPM1-230ENST00000561266 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
TPM1-230ENST00000561266 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 PDHXO00330 501 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 ALDH1A1P00352 501 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 APPP05067 770 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 HMGCS2P54868 508 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 SEPT2Q15019 361 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
TPM1-230ENST00000561266 ABCB5Q2M3G0 1257 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 MCMDC2Q4G0Z9 681 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 GIMAP6Q6P9H5 292 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 SIAH1Q8IUQ4 282 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 ADGRA2Q96PE1 1338 aa16.65■□□□□ 0.26
TPM1-230ENST00000561266 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
TPM1-230ENST00000561266 CYP2C8P10632 490 aa16.64■□□□□ 0.25
TPM1-230ENST00000561266 GNAT2P19087 354 aa16.64■□□□□ 0.25
TPM1-230ENST00000561266 MTMR2Q13614 643 aa16.64■□□□□ 0.25
TPM1-230ENST00000561266 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
TPM1-230ENST00000561266 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.25
TPM1-230ENST00000561266 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
TPM1-230ENST00000561266 ARPP21Q9UBL0 812 aaPredicted RBP16.64■□□□□ 0.25
TPM1-230ENST00000561266 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
TPM1-230ENST00000561266 RASA1P20936 1047 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 TDO2P48775 406 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 BACE1P56817 501 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 OTUD7BQ6GQQ9 843 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 CWC27Q6UX04 472 aaKnown RBP16.63■□□□□ 0.25
TPM1-230ENST00000561266 EMILIN3Q9NT22 766 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 SWAP70Q9UH65 585 aa16.63■□□□□ 0.25
TPM1-230ENST00000561266 PRDM1O75626 825 aa16.62■□□□□ 0.25
TPM1-230ENST00000561266 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
TPM1-230ENST00000561266 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
TPM1-230ENST00000561266 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
TPM1-230ENST00000561266 NKX2-3Q8TAU0 364 aa16.62■□□□□ 0.25
TPM1-230ENST00000561266 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
TPM1-230ENST00000561266 CPA4Q9UI42 421 aa16.62■□□□□ 0.25
TPM1-230ENST00000561266 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
TPM1-230ENST00000561266 TLR2O60603 784 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 PEX10O60683 326 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 FKTNO75072 461 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 FGAP02671 866 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 CTGFP29279 349 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 ZYXQ15942 572 aaKnown RBP16.61■□□□□ 0.25
TPM1-230ENST00000561266 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 C17orf99Q6UX52 265 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 FASTKD5Q7L8L6 764 aaKnown RBP16.61■□□□□ 0.25
TPM1-230ENST00000561266 TICAM2Q86XR7 235 aa16.61■□□□□ 0.25
TPM1-230ENST00000561266 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms