RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SYNRGQ9UMZ2 1314 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 RNF225M0QZC1 329 aaPredicted RBP18.69■□□□□ 0.58
TPM1-228ENST00000560975 SRGAP2O75044 1071 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 PRPF6O94906 941 aaKnown RBP18.69■□□□□ 0.58
TPM1-228ENST00000560975 ARHGAP25P42331 645 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 CCT5P48643 541 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 TUBB4BP68371 445 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 NOSTRINQ8IVI9 506 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 UBR1Q8IWV7 1749 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 NWD2Q9ULI1 1742 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 ZBTB43O43298 467 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 GUCY1A2P33402 732 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 HPCAL4Q9UM19 191 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 EYA2O00167 538 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 SH2B2O14492 632 aaPredicted RBP18.68■□□□□ 0.58
TPM1-228ENST00000560975 KCNA6P17658 529 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 GGCXP38435 758 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 ZAP70P43403 619 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 SPATA1Q5VX52 437 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 CCDC85AQ96PX6 553 aaPredicted RBP18.68■□□□□ 0.58
TPM1-228ENST00000560975 NUP88Q99567 741 aaPredicted RBP18.68■□□□□ 0.58
TPM1-228ENST00000560975 EHD4Q9H223 541 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 TFR2Q9UP52 801 aa18.68■□□□□ 0.58
TPM1-228ENST00000560975 A0A087WUV0 522 aaPredicted RBP18.67■□□□□ 0.58
TPM1-228ENST00000560975 ACTN4O43707 911 aaKnown RBP18.67■□□□□ 0.58
TPM1-228ENST00000560975 PTPREP23469 700 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 ERCC5P28715 1186 aaPredicted RBP18.67■□□□□ 0.58
TPM1-228ENST00000560975 WDR93Q6P2C0 686 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 MMS22LQ6ZRQ5 1243 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 LRP10Q7Z4F1 713 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 DIS3L2Q8IYB7 885 aaKnown RBP18.67■□□□□ 0.58
TPM1-228ENST00000560975 PBX1P40424 430 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 STIM1Q13586 685 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 VPS16Q9H269 839 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 EXOC5O00471 708 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 AMPD2Q01433 879 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 NR5A1Q13285 461 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 TRIML1Q8N9V2 468 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 MMS19Q96T76 1030 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 CSRNP2Q9H175 543 aa18.67■□□□□ 0.58
TPM1-228ENST00000560975 USP14P54578 494 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
TPM1-228ENST00000560975 NTRK3Q16288 839 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 CTCFLQ8NI51 663 aaPredicted RBP18.66■□□□□ 0.58
TPM1-228ENST00000560975 APPBP2Q92624 585 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 STAMQ92783 540 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 KAT2BQ92831 832 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 KAT14Q9H8E8 782 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 GPR108Q9NPR9 543 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 ERLIN2O94905 339 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 TMTC1Q8IUR5 882 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 CMTR1Q8N1G2 835 aaKnown RBP18.66■□□□□ 0.58
TPM1-228ENST00000560975 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 SLC52A2Q9HAB3 445 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 CEP126Q9P2H0 1117 aa18.66■□□□□ 0.58
TPM1-228ENST00000560975 MYH8P13535 1937 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 C4AP0C0L4 1744 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 N4BP3O15049 544 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 TUBBP07437 444 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 AARSP49588 968 aaKnown RBP eCLIP18.65■□□□□ 0.58
TPM1-228ENST00000560975 SAFBQ15424 915 aaKnown RBP eCLIP18.65■□□□□ 0.58
TPM1-228ENST00000560975 TTC19Q6DKK2 380 aaPredicted RBP18.65■□□□□ 0.58
TPM1-228ENST00000560975 MCTP2Q6DN12 878 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 CHP1Q99653 195 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 FAM217BQ9NTX9 383 aaPredicted RBP18.65■□□□□ 0.58
TPM1-228ENST00000560975 ABHD10Q9NUJ1 306 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 EIF5P55010 431 aaKnown RBP18.65■□□□□ 0.58
TPM1-228ENST00000560975 FBXW10Q5XX13 1052 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 XAGE2Q96GT9 111 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 TBX22Q9Y458 520 aa18.65■□□□□ 0.58
TPM1-228ENST00000560975 CPP00450 1065 aa18.64■□□□□ 0.58
TPM1-228ENST00000560975 TMEM67Q5HYA8 995 aa18.64■□□□□ 0.58
TPM1-228ENST00000560975 TTC5Q8N0Z6 440 aa18.64■□□□□ 0.58
TPM1-228ENST00000560975 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.58
TPM1-228ENST00000560975 VIPAS39Q9H9C1 493 aa18.64■□□□□ 0.58
TPM1-228ENST00000560975 CTNND2Q9UQB3 1225 aa18.64■□□□□ 0.58
TPM1-228ENST00000560975 AFDNP55196 1824 aaKnown RBP18.64■□□□□ 0.57
TPM1-228ENST00000560975 A0A087X0B3 334 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 MYBL2P10244 700 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 ELOA2Q8IYF1 753 aaPredicted RBP18.64■□□□□ 0.57
TPM1-228ENST00000560975 COG1Q8WTW3 980 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 AXIN2Q9Y2T1 843 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 ATP1A1P05023 1023 aaKnown RBP18.64■□□□□ 0.57
TPM1-228ENST00000560975 ZFYP08048 801 aaPredicted RBP18.64■□□□□ 0.57
TPM1-228ENST00000560975 SNRPA1P09661 255 aaKnown RBP18.64■□□□□ 0.57
TPM1-228ENST00000560975 KRT9P35527 623 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 CUL4BQ13620 913 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 CYP26C1Q6V0L0 522 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 SUGP1Q8IWZ8 645 aaKnown RBP18.64■□□□□ 0.57
TPM1-228ENST00000560975 FAM76AQ8TAV0 307 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 CTAGE1Q96RT6 745 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 TAB2Q9NYJ8 693 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms