RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 NOL10Q9BSC4 688 aaKnown RBP13.62□□□□□ -0.23
GABPB1-210ENST00000560825 BOLA2Q9H3K6 86 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 SRRDQ9UH36 339 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
GABPB1-210ENST00000560825 AGTPBP1Q9UPW5 1226 aa13.62□□□□□ -0.23
GABPB1-210ENST00000560825 USP17L5A8MUK1 530 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 PRKAB2O43741 272 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 FMNL1O95466 1100 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-210ENST00000560825 MS4A1P11836 297 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
GABPB1-210ENST00000560825 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 ALPK3Q96L96 1907 aa13.61□□□□□ -0.23
GABPB1-210ENST00000560825 MYPNQ86TC9 1320 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 RANBP2P49792 3224 aaKnown RBP13.6□□□□□ -0.23
GABPB1-210ENST00000560825 CYP2D7A0A087X1C5 515 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 IFIT2P09913 472 aaKnown RBP13.6□□□□□ -0.23
GABPB1-210ENST00000560825 PLCG2P16885 1265 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 SHMT1P34896 483 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 PDE3AQ14432 1141 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
GABPB1-210ENST00000560825 DHX36Q9H2U1 1008 aaKnown RBP13.6□□□□□ -0.23
GABPB1-210ENST00000560825 ARMT1Q9H993 441 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 TXNRD2Q9NNW7 524 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 SZT2Q5T011 3432 aa13.6□□□□□ -0.23
GABPB1-210ENST00000560825 GH2P01242 217 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 ELNP15502 786 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 USP5P45974 858 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 MAP3K12Q12852 859 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 CRACR2BQ8N4Y2 399 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-210ENST00000560825 SLC44A5Q8NCS7 719 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 OTUD7AQ8TE49 926 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-210ENST00000560825 ASCC2Q9H1I8 757 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-210ENST00000560825 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 PAG1Q9NWQ8 432 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 SLC45A1Q9Y2W3 748 aa13.59□□□□□ -0.23
GABPB1-210ENST00000560825 COL11A1P12107 1806 aaPredicted RBP13.58□□□□□ -0.23
GABPB1-210ENST00000560825 MAGEB6P1A0A0J9YX57 407 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 HMMRO75330 724 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 ATP5JP18859 108 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 KIF22Q14807 665 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 ZYXQ15942 572 aaKnown RBP13.58□□□□□ -0.24
GABPB1-210ENST00000560825 CLEC10AQ8IUN9 316 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-210ENST00000560825 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-210ENST00000560825 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.58□□□□□ -0.24
GABPB1-210ENST00000560825 DYNLL2Q96FJ2 89 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 P2RX7Q99572 595 aaKnown RBP13.58□□□□□ -0.24
GABPB1-210ENST00000560825 HAUS7Q99871 368 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 WDR18Q9BV38 432 aa13.58□□□□□ -0.24
GABPB1-210ENST00000560825 ADD2P35612 726 aa13.57□□□□□ -0.24
GABPB1-210ENST00000560825 FLT3LGP49771 235 aa13.57□□□□□ -0.24
GABPB1-210ENST00000560825 BACE1P56817 501 aa13.57□□□□□ -0.24
GABPB1-210ENST00000560825 GABPAQ06546 454 aa13.57□□□□□ -0.24
GABPB1-210ENST00000560825 SMCR8Q8TEV9 937 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-210ENST00000560825 YTHDC1Q96MU7 727 aaKnown RBP13.57□□□□□ -0.24
GABPB1-210ENST00000560825 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-210ENST00000560825 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-210ENST00000560825 A0A0G2JMZ2 1700 aa13.57□□□□□ -0.24
GABPB1-210ENST00000560825 FRMPD3Q5JV73 1810 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 MBD4O95243 580 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 ASNSP08243 561 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 TRIM32Q13049 653 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 Q3C1V9 767 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 KIAA1755Q5JYT7 1200 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 PUS7LQ9H0K6 701 aaKnown RBP13.56□□□□□ -0.24
GABPB1-210ENST00000560825 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 A0A1W2PRG0 241 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 GRK4P32298 578 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 FCGRTP55899 365 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 RAET1EQ8TD07 263 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 UNC93B1Q9H1C4 597 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 EHD4Q9H223 541 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 RBPJLQ9UBG7 517 aa13.56□□□□□ -0.24
GABPB1-210ENST00000560825 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 GNRH1P01148 92 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 CCL5P13501 91 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 SEPT2Q15019 361 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 TTF1Q15361 905 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-210ENST00000560825 CRBNQ96SW2 442 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 PCDH10Q9P2E7 1040 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
GABPB1-210ENST00000560825 TNPO2O14787 897 aaKnown RBP13.54□□□□□ -0.24
GABPB1-210ENST00000560825 ADCY3O60266 1144 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 CNMDO75829 334 aa13.54□□□□□ -0.24
GABPB1-210ENST00000560825 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
GABPB1-210ENST00000560825 FAM110CQ1W6H9 321 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms