RNA–Protein interactions for RNA: ENST00000560708.5

MRPS11-209, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 1,060 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-209ENST00000560708 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
MRPS11-209ENST00000560708 KIF1BPQ96EK5 621 aa16.72■□□□□ 0.27
MRPS11-209ENST00000560708 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
MRPS11-209ENST00000560708 ZBTB40Q9NUA8 1239 aa16.72■□□□□ 0.27
MRPS11-209ENST00000560708 ZBTB21Q9ULJ3 1066 aa16.72■□□□□ 0.27
MRPS11-209ENST00000560708 HMMRO75330 724 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 CCL5P13501 91 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 ELNP15502 786 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 UBXN2AP68543 259 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
MRPS11-209ENST00000560708 CLASRPQ8N2M8 674 aaKnown RBP16.71■□□□□ 0.27
MRPS11-209ENST00000560708 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 RCAN3Q9UKA8 241 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
MRPS11-209ENST00000560708 ADCY3O60266 1144 aa16.7■□□□□ 0.26
MRPS11-209ENST00000560708 BACE1P56817 501 aa16.7■□□□□ 0.26
MRPS11-209ENST00000560708 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
MRPS11-209ENST00000560708 RNF208Q9H0X6 261 aa16.7■□□□□ 0.26
MRPS11-209ENST00000560708 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
MRPS11-209ENST00000560708 MYH1P12882 1939 aa16.69■□□□□ 0.26
MRPS11-209ENST00000560708 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
MRPS11-209ENST00000560708 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
MRPS11-209ENST00000560708 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
MRPS11-209ENST00000560708 COA7Q96BR5 231 aa16.69■□□□□ 0.26
MRPS11-209ENST00000560708 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
MRPS11-209ENST00000560708 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
MRPS11-209ENST00000560708 NAV1Q8NEY1 1877 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 GOLIM4O00461 696 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 GH2P01242 217 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 INHAP05111 366 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 GJB1P08034 283 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 PDE6AP16499 860 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 IRF5Q13568 498 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
MRPS11-209ENST00000560708 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 EDC3Q96F86 508 aaKnown RBP16.68■□□□□ 0.26
MRPS11-209ENST00000560708 UNC93B1Q9H1C4 597 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
MRPS11-209ENST00000560708 MAGEB6P1A0A0J9YX57 407 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 PEX10O60683 326 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 GJA8P48165 433 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 TMED8Q6PL24 325 aaPredicted RBP16.67■□□□□ 0.26
MRPS11-209ENST00000560708 NKX2-3Q8TAU0 364 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 GCC1Q96CN9 775 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 EHD4Q9H223 541 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 ZNF532Q9HCE3 1301 aa16.67■□□□□ 0.26
MRPS11-209ENST00000560708 C19orf81C9J6K1 198 aa16.66■□□□□ 0.26
MRPS11-209ENST00000560708 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
MRPS11-209ENST00000560708 ZYXQ15942 572 aaKnown RBP16.66■□□□□ 0.26
MRPS11-209ENST00000560708 TATDN1Q6P1N9 297 aa16.66■□□□□ 0.26
MRPS11-209ENST00000560708 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
MRPS11-209ENST00000560708 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
MRPS11-209ENST00000560708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.66■□□□□ 0.26
MRPS11-209ENST00000560708 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
MRPS11-209ENST00000560708 FEZ1Q99689 392 aa16.66■□□□□ 0.26
MRPS11-209ENST00000560708 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
MRPS11-209ENST00000560708 PLCD1P51178 756 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 HERVK_113P62684 666 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 EVX2Q03828 476 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
MRPS11-209ENST00000560708 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
MRPS11-209ENST00000560708 TXNRD2Q9NNW7 524 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 EMILIN3Q9NT22 766 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 MORF4L1Q9UBU8 362 aa16.65■□□□□ 0.26
MRPS11-209ENST00000560708 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
MRPS11-209ENST00000560708 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
MRPS11-209ENST00000560708 SHMT1P34896 483 aa16.64■□□□□ 0.25
MRPS11-209ENST00000560708 CERKLQ49MI3 558 aaPredicted RBP16.64■□□□□ 0.25
MRPS11-209ENST00000560708 LCORLQ8N3X6 602 aa16.64■□□□□ 0.25
MRPS11-209ENST00000560708 SDR42E1Q8WUS8 393 aa16.64■□□□□ 0.25
MRPS11-209ENST00000560708 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
MRPS11-209ENST00000560708 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
MRPS11-209ENST00000560708 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
MRPS11-209ENST00000560708 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 HABP4Q5JVS0 413 aaKnown RBP16.63■□□□□ 0.25
MRPS11-209ENST00000560708 USP17L2Q6R6M4 530 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 UBE2Q1Q7Z7E8 422 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 DEFB118Q96PH6 123 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 MCM9Q9NXL9 1143 aa16.63■□□□□ 0.25
MRPS11-209ENST00000560708 DOCK3Q8IZD9 2030 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 FARP2O94887 1054 aaPredicted RBP16.62■□□□□ 0.25
MRPS11-209ENST00000560708 SGPL1O95470 568 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 PDE3AQ14432 1141 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 GPRC5AQ8NFJ5 357 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 PAK6Q9NQU5 681 aaPredicted RBP16.62■□□□□ 0.25
MRPS11-209ENST00000560708 GJD2Q9UKL4 321 aa16.62■□□□□ 0.25
MRPS11-209ENST00000560708 H0YGN5 161 aa16.61■□□□□ 0.25
MRPS11-209ENST00000560708 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
MRPS11-209ENST00000560708 MBD4O95243 580 aa16.61■□□□□ 0.25
MRPS11-209ENST00000560708 HMGCRP04035 888 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms