RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 HLA-DOAP06340 250 aa21.79■■□□□ 1.08
RPL28-210ENST00000560583 GJB1P08034 283 aa21.79■■□□□ 1.08
RPL28-210ENST00000560583 GJA8P48165 433 aa21.79■■□□□ 1.08
RPL28-210ENST00000560583 UBE2Q1Q7Z7E8 422 aa21.79■■□□□ 1.08
RPL28-210ENST00000560583 INHAP05111 366 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 MS4A1P11836 297 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 GCLCP48506 637 aaPredicted RBP21.78■■□□□ 1.08
RPL28-210ENST00000560583 UBXN2AP68543 259 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 MAP3K12Q12852 859 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 PABPC4Q13310 644 aaKnown RBP eCLIP21.78■■□□□ 1.086e-10■■■■■ 42.7
RPL28-210ENST00000560583 HSP90AB4PQ58FF6 505 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 RPAP2Q8IXW5 612 aaPredicted RBP21.78■■□□□ 1.08
RPL28-210ENST00000560583 PXYLP1Q8TE99 480 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 RNF208Q9H0X6 261 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 BIN2Q9UBW5 565 aaPredicted RBP21.78■■□□□ 1.08
RPL28-210ENST00000560583 DDX19BQ9UMR2 479 aa21.78■■□□□ 1.08
RPL28-210ENST00000560583 APBB1O00213 710 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 PEX10O60683 326 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 CERS3Q8IU89 383 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 GCC1Q96CN9 775 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 TRIM34Q9BYJ4 488 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 GINM1Q9NU53 330 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 MORF4L1Q9UBU8 362 aa21.77■■□□□ 1.08
RPL28-210ENST00000560583 PDE6AP16499 860 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 HOXA7P31268 230 aaPredicted RBP21.76■■□□□ 1.07
RPL28-210ENST00000560583 USP5P45974 858 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 TATDN1Q6P1N9 297 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 TMED8Q6PL24 325 aaPredicted RBP21.76■■□□□ 1.07
RPL28-210ENST00000560583 KIF1BPQ96EK5 621 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 EHD4Q9H223 541 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 MYH8P13535 1937 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 ALPK3Q96L96 1907 aa21.76■■□□□ 1.07
RPL28-210ENST00000560583 USP17L10C9JJH3 530 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 GH2P01242 217 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 HABP4Q5JVS0 413 aaKnown RBP21.75■■□□□ 1.07
RPL28-210ENST00000560583 NKX2-3Q8TAU0 364 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 U2AF1L4Q8WU68 220 aaKnown RBP21.75■■□□□ 1.07
RPL28-210ENST00000560583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.75■■□□□ 1.07
RPL28-210ENST00000560583 COA7Q96BR5 231 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 TXNRD2Q9NNW7 524 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 TMOD4Q9NZQ9 345 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 SERPINB13Q9UIV8 391 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 RCAN3Q9UKA8 241 aa21.75■■□□□ 1.07
RPL28-210ENST00000560583 BAZ2AQ9UIF9 1905 aaKnown RBP21.74■■□□□ 1.07
RPL28-210ENST00000560583 C19orf81C9J6K1 198 aa21.74■■□□□ 1.07
RPL28-210ENST00000560583 IRX3P78415 501 aaPredicted RBP21.74■■□□□ 1.07
RPL28-210ENST00000560583 EVX2Q03828 476 aa21.74■■□□□ 1.07
RPL28-210ENST00000560583 C20orf194Q5TEA3 1177 aa21.74■■□□□ 1.07
RPL28-210ENST00000560583 POTEEQ6S8J3 1075 aa21.74■■□□□ 1.07
RPL28-210ENST00000560583 CLASRPQ8N2M8 674 aaKnown RBP21.74■■□□□ 1.07
RPL28-210ENST00000560583 EDC3Q96F86 508 aaKnown RBP21.74■■□□□ 1.07
RPL28-210ENST00000560583 P2RX7Q99572 595 aaKnown RBP21.74■■□□□ 1.07
RPL28-210ENST00000560583 EMILIN3Q9NT22 766 aa21.74■■□□□ 1.07
RPL28-210ENST00000560583 TCRBV5S4A2TA0A5A2 114 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 GOLIM4O00461 696 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 HMMRO75330 724 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 SHMT1P34896 483 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 PLCD1P51178 756 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 HERVK_113P62684 666 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 TTF1Q15361 905 aaPredicted RBP21.73■■□□□ 1.07
RPL28-210ENST00000560583 DNAJC2Q99543 621 aaKnown RBP21.73■■□□□ 1.07
RPL28-210ENST00000560583 PAK6Q9NQU5 681 aaPredicted RBP21.73■■□□□ 1.07
RPL28-210ENST00000560583 GJD2Q9UKL4 321 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 TAOK2Q9UL54 1235 aa21.73■■□□□ 1.07
RPL28-210ENST00000560583 MAGEB6P1A0A0J9YX57 407 aa21.72■■□□□ 1.07
RPL28-210ENST00000560583 SLC9C2Q5TAH2 1124 aa21.72■■□□□ 1.07
RPL28-210ENST00000560583 ZNF532Q9HCE3 1301 aa21.72■■□□□ 1.07
RPL28-210ENST00000560583 H0YGN5 161 aa21.71■■□□□ 1.07
RPL28-210ENST00000560583 SGPL1O95470 568 aa21.71■■□□□ 1.07
RPL28-210ENST00000560583 IFIT2P09913 472 aaKnown RBP21.71■■□□□ 1.07
RPL28-210ENST00000560583 GABPAQ06546 454 aa21.71■■□□□ 1.07
RPL28-210ENST00000560583 C12orf42Q96LP6 360 aa21.71■■□□□ 1.07
RPL28-210ENST00000560583 RBPJLQ9UBG7 517 aa21.71■■□□□ 1.07
RPL28-210ENST00000560583 A0A0G2JMZ2 1700 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 RAB11FIP3O75154 756 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 FARP2O94887 1054 aaPredicted RBP21.7■■□□□ 1.06
RPL28-210ENST00000560583 GUCY1A2P33402 732 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 SLFNL1Q499Z3 407 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 USP17L2Q6R6M4 530 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 TTC6Q86TZ1 520 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 LCORLQ8N3X6 602 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 DEFB118Q96PH6 123 aa21.7■■□□□ 1.06
RPL28-210ENST00000560583 RLFQ13129 1914 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 TRIM32Q13049 653 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 ZYXQ15942 572 aaKnown RBP21.69■■□□□ 1.06
RPL28-210ENST00000560583 CERKLQ49MI3 558 aaPredicted RBP21.69■■□□□ 1.06
RPL28-210ENST00000560583 ACER1Q8TDN7 264 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 SDR42E1Q8WUS8 393 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 CRISPLD2Q9H0B8 497 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 BCL11AQ9H165 835 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 COLQQ9Y215 455 aaPredicted RBP21.69■■□□□ 1.06
RPL28-210ENST00000560583 FRMPD3Q5JV73 1810 aa21.69■■□□□ 1.06
RPL28-210ENST00000560583 TRIOBPQ9H2D6 2365 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 HMGCRP04035 888 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 CHGBP05060 677 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 RAB3GAP1Q15042 981 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 ABCB5Q2M3G0 1257 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 TRIB2Q92519 343 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 CRNKL1Q9BZJ0 848 aaKnown RBP21.68■■□□□ 1.06
RPL28-210ENST00000560583 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.68■■□□□ 1.062e-28■■■■■ 30.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms