RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 PTGER2P43116 358 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 CDK8P49336 464 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 RBM5P52756 815 aaKnown RBP eCLIP27.42■■□□□ 1.98
TM2D3-209ENST00000560013 DNM1Q05193 864 aaKnown RBP27.42■■□□□ 1.98
TM2D3-209ENST00000560013 TTC6Q86TZ1 520 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 COL4A5P29400 1685 aa27.41■■□□□ 1.98
TM2D3-209ENST00000560013 FOSBP53539 338 aa27.41■■□□□ 1.98
TM2D3-209ENST00000560013 KLHL40Q2TBA0 621 aa27.41■■□□□ 1.98
TM2D3-209ENST00000560013 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
TM2D3-209ENST00000560013 MYO3BQ8WXR4 1341 aa27.41■■□□□ 1.98
TM2D3-209ENST00000560013 CALM1P0DP23 149 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 CALM2P0DP24 149 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 CALM3P0DP25 149 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 IFNAR1P17181 557 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 RASA1P20936 1047 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 CCDC178Q5BJE1 867 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 TMEM87AQ8NBN3 555 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 C8orf76Q96K31 380 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 GDPD2Q9HCC8 539 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 TSPY3P0CV98 308 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 TSPY8P0CW00 308 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 NCLP19338 710 aaKnown RBP27.4■■□□□ 1.98
TM2D3-209ENST00000560013 RESTQ13127 1097 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 USP48Q86UV5 1035 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 DGKHQ86XP1 1220 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 RGS22Q8NE09 1264 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 PHKBQ93100 1093 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 OSBPL5Q9H0X9 879 aaPredicted RBP27.4■■□□□ 1.98
TM2D3-209ENST00000560013 TCP11L1Q9NUJ3 509 aa27.4■■□□□ 1.98
TM2D3-209ENST00000560013 GOLGB1Q14789 3259 aaKnown RBP27.39■■□□□ 1.98
TM2D3-209ENST00000560013 VIL1P09327 827 aaKnown RBP27.39■■□□□ 1.98
TM2D3-209ENST00000560013 SSRP1Q08945 709 aaKnown RBP27.39■■□□□ 1.98
TM2D3-209ENST00000560013 RSBN1LQ6PCB5 846 aaPredicted RBP27.39■■□□□ 1.98
TM2D3-209ENST00000560013 NIM1KQ8IY84 436 aa27.39■■□□□ 1.98
TM2D3-209ENST00000560013 IL17RBQ9NRM6 502 aa27.39■■□□□ 1.98
TM2D3-209ENST00000560013 PCDHAC2Q9Y5I4 1007 aa27.39■■□□□ 1.98
TM2D3-209ENST00000560013 STK36Q9NRP7 1315 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 RAD17O75943 681 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 DDAH1O94760 285 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 TROAPQ12815 778 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 RCSD1Q6JBY9 416 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 FBXO18Q8NFZ0 1043 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 ZNRF3Q9ULT6 936 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 PSMD14O00487 310 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 ANKS1AQ92625 1134 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 TAOK3Q9H2K8 898 aa27.38■■□□□ 1.97
TM2D3-209ENST00000560013 MYH15Q9Y2K3 1946 aa27.37■■□□□ 1.97
TM2D3-209ENST00000560013 FMNL1O95466 1100 aaPredicted RBP27.37■■□□□ 1.97
TM2D3-209ENST00000560013 KRT85P78386 507 aa27.37■■□□□ 1.97
TM2D3-209ENST00000560013 GUCY1B3Q02153 619 aa27.37■■□□□ 1.97
TM2D3-209ENST00000560013 CSPP1Q1MSJ5 1256 aa27.37■■□□□ 1.97
TM2D3-209ENST00000560013 FAM173BQ6P4H8 233 aa27.37■■□□□ 1.97
TM2D3-209ENST00000560013 MYH8P13535 1937 aa27.37■■□□□ 1.97
TM2D3-209ENST00000560013 NFIAQ12857 509 aa27.36■■□□□ 1.97
TM2D3-209ENST00000560013 ALG1Q9BT22 464 aa27.36■■□□□ 1.97
TM2D3-209ENST00000560013 IDI2Q9BXS1 227 aa27.36■■□□□ 1.97
TM2D3-209ENST00000560013 SLC26A6Q9BXS9 759 aa27.36■■□□□ 1.97
TM2D3-209ENST00000560013 RBM28Q9NW13 759 aaKnown RBP27.36■■□□□ 1.97
TM2D3-209ENST00000560013 GABPAQ06546 454 aa27.36■■□□□ 1.97
TM2D3-209ENST00000560013 CFAP100Q494V2 611 aa27.36■■□□□ 1.97
TM2D3-209ENST00000560013 GZF1Q9H116 711 aaPredicted RBP27.36■■□□□ 1.97
TM2D3-209ENST00000560013 FIBPO43427 364 aa27.35■■□□□ 1.97
TM2D3-209ENST00000560013 NBPF11Q86T75 865 aa27.35■■□□□ 1.97
TM2D3-209ENST00000560013 TRIM22Q8IYM9 498 aa27.35■■□□□ 1.97
TM2D3-209ENST00000560013 CRACR2BQ8N4Y2 399 aaPredicted RBP27.35■■□□□ 1.97
TM2D3-209ENST00000560013 GMLQ99445 158 aa27.35■■□□□ 1.97
TM2D3-209ENST00000560013 BCS1LQ9Y276 419 aa27.35■■□□□ 1.97
TM2D3-209ENST00000560013 MYH6P13533 1939 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 NEDD1Q8NHV4 660 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 GPT2Q8TD30 523 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 WASF1Q92558 559 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 KAT14Q9H8E8 782 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 SERPINB13Q9UIV8 391 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 NPM3O75607 178 aaKnown RBP27.34■■□□□ 1.97
TM2D3-209ENST00000560013 HLA-DOAP06340 250 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 OTUD7BQ6GQQ9 843 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 AIFM3Q96NN9 605 aa27.34■■□□□ 1.97
TM2D3-209ENST00000560013 MBD3O95983 291 aa27.33■■□□□ 1.97
TM2D3-209ENST00000560013 SWAP70Q9UH65 585 aa27.33■■□□□ 1.97
TM2D3-209ENST00000560013 HDAC9Q9UKV0 1011 aa27.33■■□□□ 1.97
TM2D3-209ENST00000560013 CACNB3P54284 484 aa27.32■■□□□ 1.96
TM2D3-209ENST00000560013 CMTR1Q8N1G2 835 aaKnown RBP27.32■■□□□ 1.96
TM2D3-209ENST00000560013 CCDC82Q8N4S0 544 aa27.32■■□□□ 1.96
TM2D3-209ENST00000560013 CTCFLQ8NI51 663 aaPredicted RBP27.32■■□□□ 1.96
TM2D3-209ENST00000560013 DHX36Q9H2U1 1008 aaKnown RBP27.32■■□□□ 1.96
TM2D3-209ENST00000560013 NFKBIEO00221 500 aa27.32■■□□□ 1.96
TM2D3-209ENST00000560013 JDP2Q8WYK2 163 aa27.32■■□□□ 1.96
TM2D3-209ENST00000560013 PRMT6Q96LA8 375 aaPredicted RBP27.32■■□□□ 1.96
TM2D3-209ENST00000560013 SCAND2PQ9GZW5 306 aaPredicted RBP27.32■■□□□ 1.96
TM2D3-209ENST00000560013 GJB4Q9NTQ9 266 aa27.32■■□□□ 1.96
TM2D3-209ENST00000560013 FAM198AQ9UFP1 575 aa27.32■■□□□ 1.96
TM2D3-209ENST00000560013 DEXIO95424 95 aa27.31■■□□□ 1.96
TM2D3-209ENST00000560013 ZFPM1Q8IX07 1006 aa27.31■■□□□ 1.96
TM2D3-209ENST00000560013 OGFOD1Q8N543 542 aa27.31■■□□□ 1.96
TM2D3-209ENST00000560013 PNMA1Q8ND90 353 aa27.31■■□□□ 1.96
TM2D3-209ENST00000560013 RNF26Q9BY78 433 aaPredicted RBP27.31■■□□□ 1.96
TM2D3-209ENST00000560013 TDRD3Q9H7E2 651 aaKnown RBP27.31■■□□□ 1.96
TM2D3-209ENST00000560013 GADD45BO75293 160 aaPredicted RBP27.3■■□□□ 1.96
TM2D3-209ENST00000560013 CXCL9Q07325 125 aa27.3■■□□□ 1.96
TM2D3-209ENST00000560013 TCP10Q12799 353 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms